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Domain assignment for XP_005043829.1.66865 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005043829.1.66865
Domain Number 1 Region: 918-1017,1514-1691
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.19e-36
Family Tandem AAA-ATPase domain 0.0028
Further Details:      
 
Domain Number 2 Region: 727-791,818-901
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.54e-23
Family Tandem AAA-ATPase domain 0.0051
Further Details:      
 
Domain Number 3 Region: 437-525
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.78e-16
Family Linker histone H1/H5 0.0056
Further Details:      
 
Domain Number 4 Region: 666-728
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000177
Family PHD domain 0.0053
Further Details:      
 
Domain Number 5 Region: 261-323,367-392
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000000258
Family Tandem AAA-ATPase domain 0.025
Further Details:      
 
Domain Number 6 Region: 1443-1496
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000271
Family RING finger domain, C3HC4 0.019
Further Details:      
 
Weak hits

Sequence:  XP_005043829.1.66865
Domain Number - Region: 1028-1091
Classification Level Classification E-value
Superfamily TPR-like 0.0178
Family Tetratricopeptide repeat (TPR) 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005043829.1.66865
Sequence length 1695
Comment PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X1 [Ficedula albicollis]; AA=GCF_000247815.1; RF=representative genome; TAX=59894; STAX=59894; NAME=Ficedula albicollis; AL=Chromosome; RT=Major
Sequence
MSSRRKRAPPSKVDEEKKKKLCWNMHEDRRNEMVVLDDEVTNEDHIPVPSTSASFIVIND
DSTDEDLVQKEGSGSKSVKFLTVNDEEDSYSILTPVSVQLNIIVLPYRADRSWKALLGEF
ALHLPSEQILTGEFHDRSFTLMRGDSDGELQVCVHERSEEEYSNETKEYLGAYEQRILVE
ATLSGEILEGLRWLQKKKIIGLYQRPREAHDLKVGIYLLEAGLSKPEFLSDGGGRPKKAN
QMIQKLMEKFYSFLIPDELEEDEEESDTELERQNIEELYDFVRHTHQQDIQLLRKDVQHP
ALIPILRPYQSEAVNWMLHRENHTSTPSSENALHFLWREVITLDGVKIYYNPFTGCIIRE
YPTAGPQWPGGILADEMGLGKTVEVLALILNHTGPDIKQDDLTLPEGKLVNFFVPPQPLE
GNKKKKTKEMEPKLKEKIQYPSLRVMILTAVKEMNVKKGASIIAIFKYISSIYRYDTQRN
RRLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKKRERTKEQVARTSENTQKKQL
KDAKTQTKESRNCDVTSEKVFKTASHENITMEEHDYCTTSKNNRKSEADHENSVEEKDVK
QETVVSKSPDFHGNLLVSSDVSSHPDVDVSKTAADVQQEMPKVQLSHSQERAGSSMQHTS
SVFPFNTSEYRFECICGELGLADYKARVQCLKCHLWQHAECVNYKEENLKSRPFYCPHCL
VAMKPVPTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEV
VITTYDVLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECT
TAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRK
NPRPLYSLIAKIMWRSAKKDVIDQIQIPPQTENIHWLHFSPVERHFYHRQHEVCCQDALA
KLRKISDWTLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLAS
LQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQ
RLHSTHNLMELLAKHPGIPPTLRDSRLAEEAEQLRQHYMSKSNAEVAEAHQALQPVLQTI
RELQRKIHSGSPWWLDVIQTAIQYAIDEELVQRVQNEITCNYKQQTSKLSMAEKFRDCRG
LQYLLTTQLDEVKKFQKIVREAVKNLEGPPSKQVIEAATICHLRPVRLPLNNCVFCKADE
LFTEYESKLFMHSVKGQMAIFEEMIEDQEGLVDDRLPTTSRGLWATSETERALKALLSFA
KAHRMDARLTEEGTVFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPD
EPKPNPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVN
PEPCPICARQLGSQWAVLTCGHCFCNECIAIIIQQYSVGTRRSSIKCAICRQTTSHKEIS
YVFTAEAANQEDDIPVKGSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVLDIISKAL
YDNNMVFSQINGISKFQENLSAFKYDPNINILLLPLHTGSNGLNIIEATHVLLVEPILNP
AHELQAIGRVHRIGQTKSTIVHRFLIKATIEERMQTMLKTVDRSHTSSSLKQSEASVLTV
ADLAELFTEETEELE
Download sequence
Identical sequences U3KF32
XP_005043829.1.66865 ENSFALP00000013636

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