SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pa_5_550|chrm5_SC1|Putative from Podospora anserina

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Pa_5_550|chrm5_SC1|Putative
Domain Number 1 Region: 688-754,785-988
Classification Level Classification E-value
Superfamily Ankyrin repeat 1.14e-31
Family Ankyrin repeat 0.0033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Pa_5_550|chrm5_SC1|Putative
Sequence length 1137
Comment vegetative incompatibility HET protein
Sequence
MYLVNVATKKLETFSADDIPPYAILSHTWGNDDEELSFRDIIDGLLKPGTLGVFKLDGCC
KQAQLHGLGYVWIDTCCINKSDHVELSEAINSMFKWYRDAVICYVYLADTTPNTRLSNSR
WFRRGWTLQELLAPQELSLYGSDWTFLGSREDLAVSIEHATGIPEGFLYGDGDFYRASVA
QRFSWASKRTTKRKEDMAYCLLGLFDVSLPIIYGDDHAFARLQREIMLKLRDDSIFACRG
LSYEHPTKEQSQDTIRASAGALAESPKDYEYCGAIVSHGSHSSPSNKFVIESGFLCITTT
TYTAQEGGTYGLLNCGTKDHTSEHVVGIPLQHSTSGDYYFRPHSYSARIFPKQTMDSRSV
SQSIHIQMFRDQEISRLSKPSWSIRLRTSGCLLKVLEVYPPGRLHDKLIHVDPDFDSADA
VDRTWVRLQRHGNESHLLPDFILILTITRHPEDVQGRLTCALAICSCFTTLKEIADNAQL
LWKSIFIRKQASNVSQHIGAALWRSSDSLSGHPRISVVMSEIVSPPDTTIDLTQQLSRVR
LPDRFLSALEHEDCLNQRLARKGNELEAREKQLNKTRDMLTELNKQIEKLEASKKSLNAE
DHISAMEVERLKNEKSKLESKRFKVSLNRTYLEGCLDEHHDGRNEWLRKIRLPIEKGDVT
AGDDSFLDHRLENLVRLLISVERSAPLPSTKYNPPQDMTPLAYAIQEGCYELLQRLLDQG
ADVNEIYSNGRTALLAAVIWDKDMVVQELLEHGAIVWPALLWSVQNCDRADTLSPLLKLE
ETALEVDAGRFRMLLLLAAEQGSKEIILELLSWGEGRHTFDLSIKSNQDVVWAAAVKNHD
STVRTLIKHDCSPNPLSCQRLLLRSVLENCASLPPVLWEKKKADIHAKYMGGRNLLWLAA
DRGYDSVIGSLALIQTVIDPGSMGRQMTIADDFGQNALSRAAENGHVNAAVRLLLWEDPT
VRDHDGHTALWYAVINGHADVLQALMKHKSIREDLWEMGKLLWWAVETDQEQMVDVILAN
DGALAFQHRYHDPHALLWSALGEGTTRIVGKLFAYREFQVHSVEMLQYAEKHRYDDLVKL
LSNPLTLALQGRMVVVDRVKPETGDKKQVRFGHHDGIAKFGGSMVPVETLREVEDES
Download sequence
Identical sequences B2AF47
XP_001904286.1.27508 Pa_5_550|chrm5_SC1|Putative

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]