SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 1p74_B from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1p74_B
Domain Number 1 Region: 102-267
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 1.37e-55
Family Aminoacid dehydrogenase-like, C-terminal domain 0.00000103
Further Details:      
 
Domain Number 2 Region: 2-101
Classification Level Classification E-value
Superfamily Aminoacid dehydrogenase-like, N-terminal domain 1.74e-38
Family Shikimate dehydrogenase-like 0.0000692
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 1p74_B
Sequence length 272
Comment mol:protein length:272 Shikimate 5-dehydrogenase
Sequence
MDLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNI
TSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNTDGIGLVTDLQRLNWLRPNQ
HVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQT
YDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFG
MLVAQAAHSFHLWRGVMPDFVSVYEQLKKAML
Download sequence
Identical sequences P43876
IR91 NP_438815.1.63031 WP_005694487.1.61635 WP_005694487.1.9694 71421.HI0655 1p74_A 1p74_B 1p77_A gi|16272598|ref|NP_438815.1| 1p77A

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]