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Domain assignment for gi|386038031|ref|YP_005960907.1|NC_017543 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|386038031|ref|YP_005960907.1|NC_017543
Domain Number 1 Region: 2168-2669,3083-3162
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 3.4e-152
Family Acetyl-CoA synthetase-like 0.0000000866
Further Details:      
 
Domain Number 2 Region: 6-571
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 1.57e-103
Family Acetyl-CoA synthetase-like 0.0006
Further Details:      
 
Domain Number 3 Region: 698-1063
Classification Level Classification E-value
Superfamily Thiolase-like 6.58e-98
Family Thiolase-related 0.0019
Further Details:      
 
Domain Number 4 Region: 1226-1359,1423-1517
Classification Level Classification E-value
Superfamily FabD/lysophospholipase-like 1.18e-63
Family FabD-like 0.00085
Further Details:      
 
Domain Number 5 Region: 1926-2178
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 4.56e-46
Family NRPS condensation domain (amide synthase) 0.024
Further Details:      
 
Domain Number 6 Region: 1740-1918
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 3.56e-45
Family NRPS condensation domain (amide synthase) 0.013
Further Details:      
 
Domain Number 7 Region: 2703-2894
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 1.36e-26
Family Hypothetical protein MJ0882 0.038
Further Details:      
 
Domain Number 8 Region: 3141-3215
Classification Level Classification E-value
Superfamily ACP-like 1.44e-18
Family Peptidyl carrier domain 0.0034
Further Details:      
 
Domain Number 9 Region: 1358-1422
Classification Level Classification E-value
Superfamily Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.00000000000235
Family Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.007
Further Details:      
 
Domain Number 10 Region: 604-714
Classification Level Classification E-value
Superfamily ACP-like 0.0000000000576
Family Acyl-carrier protein (ACP) 0.035
Further Details:      
 
Domain Number 11 Region: 1638-1711
Classification Level Classification E-value
Superfamily ACP-like 0.0000000115
Family Acyl-carrier protein (ACP) 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|386038031|ref|YP_005960907.1|NC_017543
Sequence length 3238
Comment non-ribosomal peptide synthetase [Paenibacillus polymyxa M1 plasmid pPPM1a]
Sequence
MLKKSSILEIIQQRVVEMPNQTIHTFLKDGELPSDLLTYAQLDLRAKAIASALQVKVKPG
QRAILLFNPGIHYITALFGCLYAGVIAVPAYPPRLRHQSLDRGSLRICSIIQDSNPVILL
TESGLLAQLEDCKEQVPELLTVLRLVVDHIPCGQANSYVPFDATSDMVAYLQYTSGSTST
PKGVMITHGNLLAQCHLMVQSLRYKEDSVSLIWLPPFHDWGLIEGIMLPVYNGHCGYLMD
PVSFVQRPVRWLEAITQWKVTHGGGPNFAFDLCIQKVSPEQISELDLSSWGSVAVSAEPV
RKDTLEQFASRFATCGFRRQALAPAYGMAETTLQVASSLNNGPSYVIADASELALNRIVD
CNDETNGVALPSCGNAGWDTRILIVDPETLKVCPDNQVGEIWVAGSSVSAGYWNQPKETV
DIFQAYTSETNEGPFLRTGDLGFLRNEELYFTGRFKDLIIVDGQNHYPQDIELTVEKSCS
IVRRGAGAAFAVTTMGTEGVGVVYEIERSARKAKLDIEAIAHQIRETISGAHGISLVCLA
LIRPGSIPKTSSGKIQRSASRKAYENGLLNTIVSWSSLEQSQKKDRAIQVDHHKWGKYAS
PEKAETLERWICEQIAPRLDILPEEVNVRMPFSSLGLSSKETILLTSEIESYVGWKLSST
LLYEQSDIHELTKYLTERNSVNNRVNKLESNPPKPTDNVESVAIVGMACRFPGASDPEDF
WQVLQRGEDCISEIPTDRWSLEKYYDADPDVPGKTYSRHGGFLSDIDVFDAGLFNISRPE
AMEMDPQQRILLELSWEALERSGQSPDRLAGHPTGVFLGLSNSDYQRLQFMDIERLGPYA
VSGGALSTAAGRISYCLGLQGPSIAVDTACSSSLMAVHLACQSLLNGECEIALAGGANLT
IAPQLYISLSKAKMLSPTGRCHTFDSTADGYVRGEGCAVIVLKKLSDAQAAKDNILAVIR
GSAANQDGRTNGLTAPNKAAQTSVIREALSNAGVLPNEVQYVEAHGTGTVLGDPIEMHAL
ADALCEERNGENTLFVGSVKTNIGHLESAAGIAGLLKTVLSLQNRSIPKNLHFYQPNPYI
DWNSLPIKVPTLNMPWQPGPSLRRIAGISSFGFSGTNVHVILEEAPSVVDKPITEPVDSS
LQLLTLSASSEWSLRTLAERYGRFLQESPSVSLADFCHAANTTRADLQYRIAMVGATKEE
MSAQLLLIDKRMDKPLSLTKTFKTPKIAFIFAGQGEAYPGMGRQLYETEFIFRKTINACD
LTLQAFPAFQGRSIKAAILGEKEANNWMEDTSYVQPLLFAFQYALTELYRTWGIEPSAVS
GHSLGEFSAACASGMLGWMDGLQLVAERGQLMQSLVEPGRMVAVMLGLAEVENLLAPYAD
RLSVAAINSAGNTVVAGDTEAIDQLCEHLNANRVDSRLLRVSHAFHSAKMDVVMEPFEAV
ATKYAYGAPQIPLIRNLTGTVWQAGVKPNAEYWRDHLRQPVKFAAGIQVLGGLGCDVFIE
IGPTATLTHLISQTLINTVSLPSLRKGGDERRTLLETLGSLYSRGSILNWSGRNTRQSKK
IALPTYPFDKKHYWSPSVTADWSNYREARGSELTSKAELSNILSSGFESTIEDHPYCDVR
KEDINYIERILENGIDRTEALAAYLHDVLASMLMLSEQSLEDQQVMSTMGFDSLMAIQLR
NRLKCDLGIDLSIALLMGEATIVSIASECARLVDLAINAGLQVEPEVIMRLDRKEKSFAL
STSQMQLWLLQEIDPLTTAYNLPTGLRLKGTLQQDILHRCLQELLDRHEILRVRIDVVEG
EPRQRVLAPEPMPLPIVDLRHLSLERAEQEARRIALEEASSPLDLNKNPLMRAQLIRLSD
EDHILLLLFHHIVADGWSLVGVLLQELDLLYTAFLKGDDYPLPELRIQYVDYAQWQRSRL
SATYLAPHLHYWKEHLEGASFEPCFPADRQRNAFTKHVGRRIHAYLSTDLIEAVNALSRA
QNVTPFVTLVAGMKALLYRWTGREDLIIGTTVSNRTTDELEHLVGDFTNHLPLRTTVSAE
KSALSFIQRVGNTVLNAFVHSECPFEKIVNAVNPDRYGNRNPLYDIAVVMHTFSDRATSL
KIGPALDVSFIAPVAQIDNGTSELDLIFDLLETPKGLLIECEFDTEIFDATTIERFIQSY
ETLMWGLVTNPTCAVKDLPLLSETEKRRLITENRQNLIEFSPQACLHQLFEKQAQSHPDN
VAVVCGDSQLTYEQLEVRSNYLARRLIDLGVGQGIGVGICTERSIETVIAILGVLKTGAA
YIALDPVYPTEHLNFILSDSSATFVVVQETTRERALQLKGAQIICIDARVKPRLEDGKPL
KVAVSPHDLAYVLYTSGSTGNPKGALITHYNVVRLFQATTDWYHFGEKDVWTLFHSYAFD
FSVWELWGALLHGGKLVVVPYTTSRSPELFLDLLREQKVTVLNHTPSAFRLLIYAICQRS
DSVPLGLRYVIFGGEALDPRQLVPWIERYGLDSPQLINMYGITETTVHVSYAPIQSIQEA
ILHPASIGMPIPDLQIHILDSSQRPLPLGAIGEICIGGAGVFQGYLNRPDLTESRLIKNP
FDTRKLLYRSGDCGRMLPGGSLEYFGRGDGQVKIRGFRIELGEIEAVIKQHPMVQDCVLQ
VWEPTSEDRRLVAHVVAKPESAKTVLFGEQMEQEQVFQWQTVFDTTYGQGEAYEDPTLNI
TGWTSSYTNQPIPKNEMHAWVEHTVAQIKRLKADRILEIGCGTGMLLFRLAPGCTCYTAL
DLSDVALNYIRSQMATVGIEENKVQLLHRSADDLSGLVDHSYDTVIINSMMQYLPSIEYF
INILHQAVQRVKPGGTIFVGDVRNAALLEIFHTSIQFFHAPEDMKLSRICAAAQHAVREE
NELLAEPEFFYALKRQIPQISHVEIYLKHGSCDSELVRYRYDVMLHISAEDAFSADSPEC
NPLVLDWQNESLTLSSLRSMIEQENPEALIVKRIPNRRLSSELGIWEQVMHGPKERTKLD
VLPLLSTWTKEGIDPEELWAWEHELPYSVHVGCGDTADERHSFHAVLLHRGMSRQGKRFF
LPEPIFEERPLISYANDPFQGTLARKLVPLLRTYVSERLPAHMVPSSFVILDKIPLTENG
KLDHKALVEPDSERPELETVYVKPRNPIEEMLATIVSEILGIDQVGVNDNFFDLGGNSLL
ATQFVGRVRAAFMVEVRLVELFTSPTIALLSEHIADLLVQEVGSEILEEIALAEDAFE
Download sequence
Identical sequences WP_014600095.1.91857 gi|386038031|ref|YP_005960907.1| gi|386038031|ref|YP_005960907.1|NC_017543

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