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Domain assignment for gi|436670088|ref|YP_007317827.1|NC_020050 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|436670088|ref|YP_007317827.1|NC_020050
Domain Number 1 Region: 488-610,642-931
Classification Level Classification E-value
Superfamily ARM repeat 2.54e-48
Family HEAT repeat 0.006
Further Details:      
 
Domain Number 2 Region: 1059-1255
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 3.17e-17
Family Bacterial lipase 0.07
Further Details:      
 
Domain Number 3 Region: 235-636
Classification Level Classification E-value
Superfamily ARM repeat 0.00000000000000489
Family PBS lyase HEAT-like repeat 0.011
Further Details:      
 
Domain Number 4 Region: 68-258
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000000159
Family G proteins 0.067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|436670088|ref|YP_007317827.1|NC_020050
Sequence length 1359
Comment HEAT repeat-containing protein [Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01]
Sequence
MIAPNEFQRYLQSILDASRKDTQQEVRDRYIPTLAELPLQVQTYTSSKPDSQESQDKKRE
QFAVLEGLRNHSPEHVLLVGKPGSGKSTSLRRLLWEESRCCVEAIEQGKSEIPAIPILLE
LRGLSGSVLVAIQKKLEWWLDLDEKILRYLLRDRRLLVILDGLNELPNDKAWQEVDEFRQ
LCADLKVPLILSTREMGSGSNLRIPKKLEMLPLTEPQMWEFVQKRLSETGGELWRQIKGR
LRELTQTPLLLKLLCDVFEQNGEIPTNRGDLFRKEFARRYEEFKPERLRNVSEDSRRSMF
DLLSYLAFTMVQGDPHTDPCKPSASWVTIPKIQAEKILATFLAGDNTPDVAVTQKAKEWL
EDLVEWHLLQVASNPAHLEFHHQLFQEYYAAEWLVRQLTELNDEELKYYLNHLKWTEPLA
MGMTFVESEAVAVQVVKRALEVDLYLGARLAGEARLSLQEATVNVLLQKNFSTSLTIWLL
EQTQSQRALPFLLDVLKNGNSDTRWRATRALGNFENVTVWIPLIELLKDDDSSVRYKAAE
SLGKLGNVETTSYLCPLLDDENWLVRSIVVDVLGQLEGRATIDCLKNALKHEDSTVRNKA
AEYLGQRATQEVIALLNEEFNRGNIDTKRDILQLLGETKSAAVLPILIHALSDEDWIIRS
EAVSQIGLLGIWLDSDLFDDAITAFINILKNDSETSVRSSAAMYLGVIGDSRVVPVLIEA
LYQDDQVVRSSAAYGLMRLQDQSAIKDLTESLKDTEDNVREAVIRTLRSLNAVNALPALR
RLLQCKAVNIRREVIFTLGFLGDSKDIPNLYKALQDKEFSVSVYAAHSLSQLNNRKGIPI
LEDALKTGNKDARKLAISGLQNFKGKVGLSSILTTAFMDDEYSIRKASIDFLEHFKESQE
VVSQLKIALSNQNEDICRNAMDAAKTLGNAEVLSDLRRLAETITVVERPLEAIAAIQSRC
QFYNYDIAGLPPPRRVKNLLHNKLDNIIQELKNVSEEPKRVINTENYFEKGTHTHTHNYA
NDSVIRKASMFGRKPSANSQPNEDSKMTGLIKILGCDNPSRRGDVVFVHGLAGHAWNTWH
WQNPEDKDYKKDNFWLTWLGNDLVDVGIWTFGYSAARLRANGSAMPLFDQASNFLDDLEN
FGIGERPVVFVTHSMGGLLVKKMLNTATNFSRNKSKEAVLKYTQGIIFLSTPHLGSDVAQ
WVKSLAGFLTTVNVEELKAHAPQLRELDEWYRQNVDELRIQTKVYYETQPTCGVLIVNES
SANPGIKDVKPIAVEADHDSIAKPKPGDSKVYLGVKKFIEEYLPPSQKSLPPAANLSHLP
QQMNDINQTIQAEYAATSGQGDAIVDVTNNHYHNNENPQ
Download sequence
Identical sequences K9X876
WP_015328354.1.47433 gi|436670088|ref|YP_007317827.1| gi|436670088|ref|YP_007317827.1|NC_020050

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