SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|522671995|ref|YP_008198456.1|NC_021718 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|522671995|ref|YP_008198456.1|NC_021718
Domain Number 1 Region: 1114-1646
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 2.09e-123
Family Acetyl-CoA synthetase-like 0.00000221
Further Details:      
 
Domain Number 2 Region: 2180-2689
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 1.44e-100
Family Acetyl-CoA synthetase-like 0.00000036
Further Details:      
 
Domain Number 3 Region: 20-554
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 3.53e-99
Family Acetyl-CoA synthetase-like 0.00028
Further Details:      
 
Domain Number 4 Region: 1915-2154
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 1.45e-27
Family NRPS condensation domain (amide synthase) 0.065
Further Details:      
 
Domain Number 5 Region: 1730-1925
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 3.11e-25
Family NRPS condensation domain (amide synthase) 0.035
Further Details:      
 
Domain Number 6 Region: 866-1090
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 9.78e-20
Family NRPS condensation domain (amide synthase) 0.039
Further Details:      
 
Domain Number 7 Region: 688-838
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 0.000000000000856
Family NRPS condensation domain (amide synthase) 0.045
Further Details:      
 
Domain Number 8 Region: 1626-1697
Classification Level Classification E-value
Superfamily ACP-like 0.000000000406
Family Peptidyl carrier domain 0.015
Further Details:      
 
Domain Number 9 Region: 580-650
Classification Level Classification E-value
Superfamily ACP-like 0.0000249
Family apo-D-alanyl carrier protein 0.066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|522671995|ref|YP_008198456.1|NC_021718
Sequence length 2721
Comment peptide synthase [Alteromonas macleodii str. 'Ionian Sea UM7' plasmid unnamed]
Sequence
MNDVNSINTGNFVANMLLNWQSLGDKRAFVYLHKGEKEEAVVTYSELTVEIPRIAHNLVH
EHHLTEGDRVILMLPTGIEFIYYFFACIYAGIIVVPMPDTFNTKKIDRLRAVMASTEAKL
LIINEQQASRISDANTFEGDTATLVVEYEKQACNRASCRMNPQTVAYLQFTSGSTSTPKG
AVITHQNLTHQTRLLADSFAQTEDSVFVNWLPMYHDQGLVSGLLLPASLGATSILMSPLA
FAQKPIRWLQAVSKYKATTSGGPNFGFAQLANLPLSAKDKFDLSNWTTAFCGAEPIRMQI
VNKFIDKYKAHHFQPCSFVPAYGMAESTLVVTRNKPLPKERAHALDLKLTSAHWRISEPP
VSCGTAQSGMDVQIVDPETEKVLPEGKIGEIWLSGPSMAKGYWRDGRICQDAFQCQIASM
PNLRYFATGDLGLVFQGELYVTGRLNEAFKLRGMKIFFHELEASVRECMPHNQRANGSCA
VIDNLDDTVSLLISIKPAHLDSLNTEAEAMKLAEQLAFEHEVRLSKVYFVKERMPVTSSG
KLQRIQCNRLFDQKAFSVLDTVELGLGKAPETDPHNRCSEPLASLLCDIIKSDDVVLSNE
VRLHSLGLSSIEFIQLQHKIESKLGVAIELKQLMSGISVGELDKLINTATKVSTTSLPDV
QEYEQPPLPRHVVDILLADEVSGRGAGYLFRTLAIRGPLNKSSFERSFTNLIASYPILLS
HFRRERESFVLRFDSQVADGFRYADKKSEKDVVIQELLEQRIQNIAKQRRGQNHYMEVFQ
ASEQDFYVLFAFHHAICDFWSLANYLKAFLAEIAPQSNEVSSIKNGADYSHYLQWYANYR
SSAAFEEDKKFWLASQSVQGSSVQSIQTLHTLAVRRCFELPARLCQQIHKQVHTLSVTQN
SIIIAAYELALSLYNCSRNVGYSLALANRPHHSFSDCLGMFANIVPCKSDISDGVAIADF
VRTKAAYLTDILSHQSFPVSEIMPIRGGEQQSVIGNLFSNTVYAFHSVPFKEQDANIGKL
ICGIPETVGWRGLSIQPTANCMKESVYALHFNVLAHQNKFYCIVETDQQHEPHLQPFYDA
FLSFLELMNQRISDDVLEIMDVARASVIDTSLGLAKCRLETDTPLYLDAITQQLERQPSR
DLILQADDLESPLSAGEFLARARNLASHLRSGCAIEEQDVVAIMVPRGARSTIGCLATLM
AGGVYLPVDSQLPAVRKQEILHIAGAKLVICDAANCEIEPTFATLDIDQWQASWSEDSQP
GPVNLPDIHPAAPAYLIFTSGSTGKPKGALISHEAINNRLNWMQQQFVFSAEDVFIQKTP
LTFDVSMWEILSPLICGGRTTILAAGDEKFPDKITRTIEENRVTIAHFVPTMLALWLDFM
TGKSNDGSLRMCICSGEHLLPAQAETFHTWFAGSCELKNLYGPTEAAIDVTFADIKDNDV
HIGNSAPGCRMLILDDDDQPLPKGVNGHLWIEGIQVGLGYVSEPELTAQSFQYGPEGEKR
YRTGDIAHWRGDGNLALVGRQDSQIKLSGYRIELSEIERSLTCHPDVIQAVVLVLHESML
VGFVQSGRDTLSSMTLSSYLEDRLPGYMVPNQILILQELPLQANGKVNRRKLKQLWSHNS
DSQTAVEPESDWEAACFTAWENVLKVPVTHRSDDFFAKGGDSILALRMSAELRSKGYQCS
VEGIFNERTIGRIVQSITTALPADLPFNTTEPFSQLSETDSAKIPRTLLTDCYPLSQLQQ
NIIYQSLNSSNYEIYVTTLRIQAKWCRRSMERAIELIVHRHPFLRGAIDIASYSELIQLI
YRDIPCVLNIHDVTGLNADEQKTQLQQWLNNEKSTPFEWHKPPLWRLHVHLLDDCNFQLT
FSEVSMDGWCVATVLSELLDVYSSLLDGQTVSYPDIPIQYADFVAYERSILQDTRHTQYW
QNYVQALEVTLIHDNVTYGVSHANQVIGQSQRRRKVMVCEQLELIKTLAEKTKVPLKHVL
LAVHATVISTLSGKSMISTGMEVNSRPESIGGDQIVGVFNNMVPLSVDLKNQDWKALCRQ
CFAIEQEVLKYRRFPYNEIRKLNGNRDLFDTLFVFTHFHNYQSVVNAQNLAVTEHYASDQ
TYIPLTAHFNLNVDGSELTLLLDYEAEQLTDQQAQKIVHYYAEAIRHCTTQADGEVLNAS
LLSAQELELLAPQSNELRSHQTAQQMLCEALVRNQNQLAVIDGEYRFSFAQLDKFTDVLA
GQMMKFCTSPALVLCRTSVEAIIAIVACVKLGVPYIPVDPETPKNRLEQIAKDSGAGCYL
ITSEQSEMASLEISSVTVDIQQLRALPRPEFLHQPALLMDIVYIIYTSGTSGKPKGVAIP
QGALANYMHNALAGYLNENSDSSEIPLHGSLAFDMNVTPLYAALLSGACLRIFRHEDFYK
SVLAEGTDKYRFVKLTPTQLELTNQIADASGMAQHSWLNNQCTLLLGGESLSHQTVDSIY
SEVINEYGPTETCVGCSVYKINGDESLSDECKADISNHVPIGKAIGNMQIYVLNENLLPV
PVGVQGQICIGGAGLAQGYVNQPGLTAKKFVPNPFSKVPGERLYLSGDVGIVCADGNVLC
VGRQDQQVKINGFRIELEEVASVATQHKTVSNSAAVVVSHNGQSSIVLFVIPDIRLPFEQ
QSLLDYLADYLPSYMIPKDIMTLDVMPLTGSGKLDRTALLGIWQTHNEQNVTNLVSQIES
LSDEEVEKLLNDSSFLEQGVS
Download sequence
Identical sequences S5C517
gi|522574613|ref|YP_008174041.1| gi|522671995|ref|YP_008198456.1| gi|410863939|ref|YP_006979098.1| gi|410863939|ref|YP_006979098.1|NC_019394 gi|522574613|ref|YP_008174041.1|NC_021711 gi|522671995|ref|YP_008198456.1|NC_021718 WP_015068685.1.24997 WP_015068685.1.30323 WP_015068685.1.36926 WP_015068685.1.68468 gi|522666236|ref|YP_008194698.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]