SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for cath|current|1dabA00/1-539 from SCOP2 SCOPe CATH ECOD

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  cath|current|1dabA00/1-539
Domain Number 1 Region: 2-539
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.04e-106
Family Virulence factor P.69 pertactin 0.0000000000000032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) cath|current|1dabA00/1-539
Sequence length 539
Sequence
dwnnqsivktgerqhgihiqgsdpggvrtasgttikvsgrqaqgillenpaaelqfrngs
vtssgqlsddgirrflgtvtvkagklvadhatlanvgdtwdddgialyvageqaqasiad
stlqgaggvqierganvtvqrsaivdgglhigalqslqpedlppsrvvlrdtnvtavpas
gapaavsvlgaseltldgghitggraagvaamqgavvhlqratirrgdalaggavpggav
pggavpggfgpggfgpvldgwygvdvsgssvelaqsiveapelgaairvgrgarvtvpgg
slsaphgnvietggarrfapqaaplsitlqagahaqgkallyrvlpepvkltltggadaq
gdivatelpsipgtsigpldvalasqarwtgatravdslsidnatwvmtdnsnvgalrla
sdgsvdfqqpaeagrfkvltvntlagsglfrmnvfadlglsdklvvmqdasgqhrlwvrn
sgsepasantlllvqtplgsaatftlankdgkvdigtyryrlaangngqwslvgakapp
Download sequence
Identical sequences 000007225|e1dabA1|207.2.1.80|A:1-539 cath|current|1dabA00/1-539 d1daba_ 1dab_A 1dabA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]