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Domain assignment for A0A0D9UX45 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0D9UX45
Domain Number 1 Region: 841-880,917-1031
Classification Level Classification E-value
Superfamily BRCA2 helical domain 7.59e-41
Family BRCA2 helical domain 0.00056
Further Details:      
 
Domain Number 2 Region: 1032-1175
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.2e-36
Family Single strand DNA-binding domain, SSB 0.00023
Further Details:      
 
Domain Number 3 Region: 1207-1320
Classification Level Classification E-value
Superfamily BRCA2 tower domain 2.35e-33
Family BRCA2 tower domain 0.0013
Further Details:      
 
Domain Number 4 Region: 1177-1206,1320-1405
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3e-25
Family Single strand DNA-binding domain, SSB 0.014
Further Details:      
 
Domain Number 5 Region: 1411-1541
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 7.88e-16
Family Single strand DNA-binding domain, SSB 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0D9UX45
Sequence length 1552
Comment (tr|A0A0D9UX45|A0A0D9UX45_9ORYZ) Uncharacterized protein {ECO:0000313|EnsemblPlants:LPERR01G03750.1} KW=Complete proteome; Reference proteome OX=77586 OS=Leersia perrieri. GN= OC=Oryzoideae; Oryzeae; Oryzinae; Leersia.
Sequence
MQRRWQVWGKPDGTLVWIPASDDPPSTPPPAAAAAVSEAPILHPHPQPDAADSGDAIIEG
PGAADECRLPSMADLFNQALDKLVATDRVDGAIKDEGKGGVFTTGLGRSVAVSDKSIEKA
KALVGEVVEETSIKRKQPFGDGSHLECKLAESNVSFKGGVHKYNLSPMFQTGTGKAVSLS
KDSIQKAIVVLEGNVEHSAITVQSMFHTGLARSDPVSRSSIDKAMAVLEEKTTARQGDAA
GVDDKEHFPLFQTGLGKAVSVSVASIQKAKAVLEQNYANEGNMEDFGRPDQSLVFQTGSR
RPVSVSERSSSVVKEGGSENIRLGRPVAVSHTSIQKARTSLDEEDAKISGHGDTSLCTTT
FRTETPTSVLTSGGLIMNDRSVTPEGDVSMQGKKFGADGLMPLFQTGLGRSISVSKSSIK
RASTLLEPRNITKELEDEAHSDDGCATPMFRTGSGRSITASENSRKKAHVVLEAEEAAKN
VNNDAGEAIDPMLHAGIQKLPQNRSSSHKANTLIEEGSSIKEDCGSEMPMFRTGSGKSVL
ISDSSVLKARAVLEEEGNMKRENHRQHNNVDKHIPVFTSPLKTSCRRTVNISSVGVSRAA
TLLGLEENTLSTQLLGRVEDKLGTKIMVERENSEQHQFGVASVRGISGGRPMSSCPPENQ
VLMGPHQQFAFSKTTISDSSGQAIRFSTAGGRSMAISSDALQRAKNLLGESDLEVLPNNF
LGHSSASACKEMLQNSTGLCKEGEPDLLKINRGNSKTEPAKFSFSAMPDRKHTGSLGYAL
PDTTVANGSSARFHAAKDYHHINGIPKIPKPLSSCSFGAENASDTKDKDRRLQMPSGPLV
DITNYMGTHSVNTGYVTSEKRRIGGRNSISPFKRPRSSRFIAPMNVKNPSPAGASKLPIQ
ISPSRMKLSSCYPFQHERKSYKEYFGGPPHFKCLKEDITDEVKFMDAKKAEMYKFNTDTG
AEEFQTMLLACGASLTYATKEWVSNHYKWIVWKLASLERCYPTRAPGKFLKIGNVLEELK
YRYDREVNNGHRSAVKKILEGNASPSLMMVLCISTIYSCPDLNNSKQEDGRAHANEDNSE
NKSLVAATRNMSAKIELTDGWYSLDASLDAALSDQLEKRKLFIGQKLRIWGASLCGWAGP
VSFHEASGTVKLMIHINGTYRARWNETLGLCKQAGVPLAFKCIKASGGRVPRTLVGVTRI
YPVMYRERLSDGGSVVRSERMERKALQLYHQRVSKIAEDIQSEHGEYCHNTNDNEEGAKI
CKMLERAAEPEVLVASMNSEQLLSLSHYQEKQKIVRQNEVAKKVENALKVAGLSSRDVTP
FLKVRVMGLISKHSATKSSHREGLITIWNPTEKQKSDLVEGQIYSVTGLVPSNYFTEVSY
LHGRGSSTAWKPLASGQTTNFEPFFTPRKAVELSHIGVILYVGNVYLLNNQNRQWLFLTD
GSKFISGEKSEEQDDCLLAVSFSSPTTDEDSAFFNHALSGHIVGFSNLVKRQKDQMRHMW
VAEATESSTYTLSHEIPKKSHLKDATTSAEKWASSSHADWTKMKPMAVGCST
Download sequence
Identical sequences A0A0D9UX45

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