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Domain assignment for A0A178URR8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A178URR8
Domain Number 1 Region: 458-626
Classification Level Classification E-value
Superfamily BRCA2 helical domain 1.96e-59
Family BRCA2 helical domain 0.00037
Further Details:      
 
Domain Number 2 Region: 627-755
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.74e-38
Family Single strand DNA-binding domain, SSB 0.00021
Further Details:      
 
Domain Number 3 Region: 757-786,905-990
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.11e-26
Family Single strand DNA-binding domain, SSB 0.0098
Further Details:      
 
Domain Number 4 Region: 787-905
Classification Level Classification E-value
Superfamily BRCA2 tower domain 2.75e-16
Family BRCA2 tower domain 0.0032
Further Details:      
 
Domain Number 5 Region: 995-1128
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000000754
Family Single strand DNA-binding domain, SSB 0.09
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A178URR8
Sequence length 1155
Comment (tr|A0A178URR8|A0A178URR8_ARATH) BRCA2B {ECO:0000313|EMBL:OAO95824.1} KW=Complete proteome OX=3702 OS=Arabidopsis thaliana (Mouse-ear cress). GN=AXX17_At5g00700 OC=Arabidopsis.
Sequence
MSTWHLFSDSSGDGFRWEVAGRILQSVSDSTPTKALESTAPLPSMADLLLQGCSKLIERE
ESMPGEIPMFRTGLGKSVVLKESSIAKAKSILAENVAYSDLQNTNCSIPQTRQVDTAETM
PMFRTALGKTVPLKESSIAKALSILGSDMIIDSDNVLPRESGFGVPNSLFQTASNKKVNV
SSAGLARAKALLGLEEDDLNGFNHVNQSSSSLQQHGWSGLKTHEEFDATVVKHHSGTPGQ
YENYVSGKRSEILNPSLKVPPTKFQTAGGKSLSVSAEALKRARNLLGDPELGSFFDDVAG
GDQFFTPQKDERLSDIAINNGSVNTGYIAHEEKTSNKHTSNSFVSPLHSSSKQFRSVNLE
NLASGGNLIKKFDTAVDETNCALNISKPATHGLSNNRPLASDMAVNNSKGNGFIPRARQL
GRPADQPLVDITNRRDTAYANNKQDSTQKKRLGKTVSVSPFKRPRISSFKTPLKKNAQQA
SSGLSVVSCDTLTSKKVLSTRYPEKSPRVYIKEFFGMHPTATTRMDYVPDHVRRIKSSNA
DKYVFCDESSSNKVGAETFLQMLAESGASLQHASRKWVTNHYRWIVWKLACYDIYYPAKC
RGNFLTITNVLEELKYRYEREVNHGHCSAIKRILSGDAPASSMMVLCISAINPRTDNGSQ
EAHCSDNCSNVKVELTDGWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTS
PLEAVISSTICLLLNINGTYRAHWADRLGFCKEIGVPLAFNCIKCNGGPVPKTLAGITRI
YPILYKERLGEKKSIVRSERIESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSE
EGAKVFKLLETAAEPELLMAEMSLEQLTSFTTYKAKFEAAKQMQMEKSVAKALEDAGLGE
RNVTPFMRIRLVGLTSLSNEGEHNPKEGIVTIWDPTERQRTELTEGKIYIMKGLVPMNSD
SETLYLHARGSSSRWQPLSPKDSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVG
DAYTDVLQKKQWVFVTDGSTQHSGEISNSLLAISFSTPFMDDSSVSHISHNLVGSVVGFC
NLIKRAKDATNEMWVAETTENSVYFINAEAAYSSHLKTRSAHIQTWAKLYSSKSVIHELR
QRVLFIIGACKSPSC
Download sequence
Identical sequences A0A178URR8

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