SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1V4K9H1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1V4K9H1
Domain Number 1 Region: 2470-2659
Classification Level Classification E-value
Superfamily BRCA2 helical domain 1.96e-80
Family BRCA2 helical domain 0.000000143
Further Details:      
 
Domain Number 2 Region: 2821-2958
Classification Level Classification E-value
Superfamily BRCA2 tower domain 4.19e-58
Family BRCA2 tower domain 0.00000757
Further Details:      
 
Domain Number 3 Region: 3044-3179
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.34e-43
Family Single strand DNA-binding domain, SSB 0.0000365
Further Details:      
 
Domain Number 4 Region: 2660-2790
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.48e-42
Family Single strand DNA-binding domain, SSB 0.00000409
Further Details:      
 
Domain Number 5 Region: 2792-2821,2960-3043
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.2e-33
Family Single strand DNA-binding domain, SSB 0.00013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A1V4K9H1
Sequence length 3356
Comment (tr|A0A1V4K9H1|A0A1V4K9H1_PATFA) Breast cancer type 2 susceptibility protein isoform A {ECO:0000313|EMBL:OPJ81074.1} KW=Complete proteome; Reference proteome OX=372326 OS=Patagioenas fasciata monilis. GN=AV530_002846 OC=Patagioenas.
Sequence
MLLRFLKNCSGSLMDKKMAYSPVERPTFFEIFKARCSESDLGPISLNWFEELSAEAPPYE
SKLLGELDGPPGWLDQTSFKTPRAKPSTYSQLASTPLIFKEQNTILPPYSSPGKELDQKK
IGASRDNLISPSITRREVDQENEIFASPPGTCHNCLAASPAISRNTYRTPQRSTIPGPYG
SLFCTPKLLEVRTPKRISESLGAEVDPDMSWSSSLATPPTLGATVIIARENDSISGAKQQ
GERADIALQSFISNHDKCPVTSDTGLLSVPETVKPNAEDDIKDFESEMLDALFGEMNSFE
DTFNMPVNSSGTLLLMPRALDVVEKCEINTDKAQGKRDVPSEQSVRRKAGISCDLKTTSQ
TENSHSIEVKDSLLQNIDEDMGAVKDSCLEGHENELEPLNITGDVQDYRTYVSAENEKPV
KEDVPSSSSQWSQLSLSDLDVTHLETSVCSSPSSDFCREKNLGDKSVLVTRDDAVETSLL
NTSGLIKAQKLLTAKLSEKCYDVQNSENNQTWEITPVKSVSLSVQDPKLVKGCADEKVSK
MSFLNCNSFLIESTNVTEYSVVYNGSFSRRLKATSKSVVADVLSHPLVCGATSPDNCNDL
HLINNENTPAKSSFKNLNVLSSLRKRSKRFIYAINNTLLYQEEKIQKDVTSESPAHPILP
HLESDSCEFKGCHVASVDDQDCFLLSERKCLQSNVREKNFSTCTLKMDTMDNSSDNLFND
RLKQQDLRNLGENAREDQPATLLKCLELSNTQKEDTTTCLNSEIISNIKRKVLTSARLMA
RKHSRLLLKGCCLEKGKEDKYMSANVNVGATVPQSLKEELVWSSRNNEHLSDTHHDTMSG
MNDGFNNTLSQISFGINGVSNDCHNKISTDKRCATDQWSVVGCREVLGPLGINSSENDNT
GLKQGEKTDAAAFSEVVANNEEPKSAENNGSAQAAAVNNVPVETAKELLDCIGDNSLNEV
ISEDNKQVAPMYSSKKPNENLKYKGKPSGNLNACSFNPGSGGFQTASNKRIKFSEVSLAK
GKMLFRDIENECFEAYSMERVRNFSNQVKKENLFLSDSGSKSSSNLSDSLDSRTSSLEPR
HTQLVPHKAGLCKSFPRSQQSLQEKNQTLTASQEAEIAELSSILEETGSQFEFTQFRKQS
NMMQSQAFQQFRSVGTHGAKNVENISETREDADFCSTFISENQVKNDKYYTKQEDTNEDT
NVVEYKTDSGVVFHKNDKKVTFTNLDRNGSRMSDESFPVAKQDGFSSFIGFTSAGGKKIS
VSKAALKRSAELFRDLDDDNYLFKSPETSTTCHNSNGHISSNCNFVRCMTKENKKIVCVS
DFKSMDAVSHTDSVAHHVQEKNEENTSTPFKENTENERKISKNATENYDSTSTIVDGLSS
IKKHNQNLKTSKQFFSQGDCQVEGSLQEDSLDVTCPGNAITTAEEHSLSDEMENLSPNWK
EDVKQENELLSQKCQTPAGGNVSISDAALDNSLHLLNVQCGESNVNVLENCDKQKANSTN
MEGEDTTHGKILLVNESGIKMGSYHHHQIPFEQEVNVEKNEVKGSYLTDFHTASGKKITI
ADGFLAKAEQFFAENADLGKEHCDSFENPLKKRKCAKNSVKDLCVESIAQCDPEKLDFYK
KLVPKEPGDQFKQTVESSPVKHAVILDTVKVDTFVNLGEDCKSSETSYAHKKADVRPGKP
ELESFLRQESDALTRTHLSEGGKLFAEREMAYSAKQRDDSEITHDFPVHSAASLHLMKVS
NDLADNSVPGDTKNTSFVEDSNNNQSLLLTSESSSSHLNCDSEFDLEHLNKPCADTNSFT
DTIVNACESQSLISPPEHQTNLTSLKEMSLNVENQKDDTKQIVFSTAKGKRVFVSESAVA
RVRRMFQEDCSKSVKYEIETKSRTDQAEIARNSSCVIRAECPNSVNFLSATRSEEINSAS
SHVIKVSASASDNGHQDTNTCVDSNSQRRQLEQNVKLLGHLPVPDKQVKQPNSSTSNLGF
FSTASGKPVQLSEESLRKARQLFSEMEGNNSSHLQEPFLVEEEAVEESEMHTDVVPRKMQ
IVLPKEEEQNSTEWISDPAFGFSTASGKQVTVSKNAYQKAKAILKESDFISNELGITDQL
SSINGSGEHAKSSIDEVISESKIEKSCDEDVNLKSIYAEEMKSLPSNHHVKMPEYVPHSK
KNEQLTSFKNSFQQEETRSFGKGQLNLGMKTDSEAISCNATAGAGINTNLLQTPRNYLEM
EAVESARAFMEDDISDSGIQIKASQSFSGRLDKNFQSKTFGKRHFEDKNSFGEPPVKRQL
LLEFNRTKNLSRSLKASKSTPDGIFKDRRKFMYHVPLKPITCQPFGATNERQEVKNPTLT
VPDQDFKGFKSKPAIFQHCALRQSANGTAGFSTPCKASAKESEETRSLYKSGKAVKTFIP
PFKTKLTFSAGEQGSSSRICDSPIRKNVTEEMELNQITTQEGVAEPQDHQSCIQHAADTD
LENDDLAMVQMLTNLRCARDLQEMRIKKKYRQNISSQPGSLYVIKTSARNRISLKTAVEE
KSPGFYSTEELYTYGVSKHCLQINSTNAESFQFLIEDFFGKEYLLAGNGMQLADGGWLIP
TDEGKAGKKEFYRALCDTPGVDPKLITETWVYNHYRWIVWKLAAMEVSFPREFANRCLTP
ETVLLQLKYRYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLNTVVSPSSSNKNV
ESKKAAAIIEVTDGWYGIRALLDPPLKAFLHRRRLTVGQKIIVHGAELLGSQNGCTPLEA
PDSLMLKISANSTRCARWHAKLGFHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRTYPLQW
MEKTSAGSYVFRNNRAEEREAAKHAEDQQKKLEALFAKIQAEYEKHEERTRRTTPRSRIV
TRQQIHNLQDGADLYEAIQNASDPGYMEGYLSEDQLKALNAHRQLMNDKKQTQIQEEFKK
ALESAEQEENGCSKRDVSTVWKLCVVDYRKQEKHKGVILSIWRPLLDVCSLLKEGGRYRI
YQLSASQAKGRSDSTNIQLTATKKTQYLQLSVSQEMLAQIFFPRQALKFSCLLDPSFQPP
CAEVDLVGVVVSVSRTGFATMVYLSDESYNLVAVKIWTDLRHFAIEDIVVRCSFISASNL
QWQSEFRSAIPVLLAGDLSIFSACPKEKYLQEKVNELKSMIENVASFCSDAESKLMNLLR
RNLSLTPTLTKRCGWECPSPSCSSGLYAEDKTSMSSKTEIKHPSPLSTSTPNMKLVTPGS
AKTPSSSTINEDHRKNSKKRKAMDLLSCIPAPPPLTPLCSIISPSVKRAFQPPRSLGLQR
SKSSKETNRNIGCATPCRKLRQTVHLPENDLVADEELAMINTQALMNNLPEEKKIH
Download sequence
Identical sequences A0A1V4K9H1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]