SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A2K3NWF1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A2K3NWF1
Domain Number 1 Region: 523-686
Classification Level Classification E-value
Superfamily BRCA2 helical domain 2.62e-41
Family BRCA2 helical domain 0.00054
Further Details:      
 
Domain Number 2 Region: 687-816
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.31e-36
Family Single strand DNA-binding domain, SSB 0.00014
Further Details:      
 
Domain Number 3 Region: 819-848,966-1049
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.14e-23
Family Single strand DNA-binding domain, SSB 0.0086
Further Details:      
 
Domain Number 4 Region: 849-966
Classification Level Classification E-value
Superfamily BRCA2 tower domain 4.32e-19
Family BRCA2 tower domain 0.0031
Further Details:      
 
Domain Number 5 Region: 1057-1208
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000000108
Family Single strand DNA-binding domain, SSB 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A2K3NWF1
Sequence length 1212
Comment (tr|A0A2K3NWF1|A0A2K3NWF1_TRIPR) Breast cancer type 2 susceptibility protein {ECO:0000313|EMBL:PNY07364.1} OX=57577 OS=Trifolium pratense (Red clover). GN=L195_g003859 OC=Trifolieae; Trifolium.
Sequence
MSTWQLFSDADNNYRWQINSDDTSNLIKPPTPPIPTSTLPSMYNLLLHASTSHLFQPQDD
ENAMDDSFGFSNSLFKTASGRKVTISPNGIVRAKTLLGLGLNDEIVSSDIQTPLSAKKFN
GFDEELPRLKVIDSCKKSSSVSFQSPLVSRLRNGFEDKIVQPDSACSSVKQAPVKFQSVV
SDIQTPQNVKKFNVFDEESPHLQSMDSCKTKSVVSFQSPLVGRLKHGFENKIVQPDSGSV
SCAKQVPSKFQTIGHIQTPQNVTKFNAFDEESPHLQLMDSCKATSVVSFQSPLVGRLKNG
FESTSVQPDSGLGGGAKQSSIKFQTAGGRSLSISRDALKRARSLLGDPDLGDFFDGGDSL
FSFPDKRQTNTIISSVERSESNNTQTPLLHQMTPESNHNHMKKSFKYPLQPSKQMEFSNK
LPHEGNGNNLIRKFDDAVNESDCGRKSSSTPGQKPLYNKNDVVNSTIKSSSLNGFSSRMG
SRGKPLGRALVDISNTTTTINTNNKQPSGGKRRLGLNATVSSFKKPRISNISASGDQVVQ
KFPNDLSQLSSGASGCKRNVSTRYPFRYPRMHIKEFFAVPPLEQKLHFPNQVRQVTSGNA
GKYIFNDGSDDSGMGAEAFVHLLAQHGASLHFASKEWVLNHYKWIVWKLACYERCYPARC
AGKFLTVSNVLEELKYRYEREVNHGHRSTIKKILEGDGLPSSMMTLCISSVHSDHVLESG
TLFEAQTGNQSTEAVKVELTDGWYSINAILDVPLSKQLATGRLFVGQKLRIWGAGLCGWN
GPVSPLEVSSTVSLFLHMNGTYRAHWADRLGFCKVAGPPLAFKCIKSNGGLVPQTLAGIT
RIYPILYKERLSSGRSVVISERMEDKMMELHNQRRSAIVDNIVSEYQKERTGSHIYDYGD
SEGAKIYKMLETAAEPEFLMADMSPEQLNSFAAYKAKLNATRQSQMESSIEKALKDSGLG
NREVTPFMRLRVVGLTYKTRREKPKEGIVTIWNPTQKQRQELVEGEAYAIAGLTPSGSDS
DVLHLQTRGSTTKWLPLSSSAKEQFKPFFSSRKSIPLSSLSDIPLSNEFDIAAFVVHVGE
VYTSNQQKKQWVFVTDGSIMHGLRSEKLMDTLLAICFCSPLIDHDSFPPINYNLAGSTVG
FCNLIKKEKDHTNHVWVADANENSTYYLKFDSLHCSHLQNAASSVTRWASESSLIMEKLK
EKVFDIIGDCKA
Download sequence
Identical sequences A0A2K3NWF1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]