SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for M0W0R9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  M0W0R9
Domain Number 1 Region: 8-96
Classification Level Classification E-value
Superfamily BRCA2 tower domain 6.87e-21
Family BRCA2 tower domain 0.004
Further Details:      
 
Domain Number 2 Region: 96-181
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.00000000000129
Family Single strand DNA-binding domain, SSB 0.0093
Further Details:      
 
Domain Number 3 Region: 184-253
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.00000557
Family Single strand DNA-binding domain, SSB 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) M0W0R9
Sequence length 281
Comment (tr|M0W0R9|M0W0R9_HORVV) Uncharacterized protein {ECO:0000313|EnsemblPlants:HORVU3Hr1G017990.60} KW=Complete proteome; Reference proteome OX=112509 OS=Hordeum vulgare subsp. vulgare (Domesticated barley). GN= OC=Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
Sequence
MTVTLSCRVSKIAEDIMSEQDENCANTDDSEEGAKICKMLEQAAEPEVMMAGMTSEQILS
FSSYQAKQKEARQNEVAKKVENALEVAGLSSRDVTPFLKVRVTSLVHRISATKTINKEGL
ITIWNPTEKQKADLVEGQVYIATGLLPSAHCTNILYLHARGSSTTWNSLTSAQAADFEPF
FTPRKAVELSWIGEVPLTSEFDIAGVVLHVGDVYSCSSQKRQWLFLTDGSKFISASQSTE
QDDYLLAVSFSCSTVGDDSAFFSYALSGNTVGYLRLVFIPS
Download sequence
Identical sequences M0W0R9
MLOC_39610.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]