SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for R6D9E7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  R6D9E7
Domain Number 1 Region: 6-235,483-539
Classification Level Classification E-value
Superfamily Zn-dependent exopeptidases 1.83e-28
Family Bacterial dinuclear zinc exopeptidases 0.01
Further Details:      
 
Weak hits

Sequence:  R6D9E7
Domain Number - Region: 345-390
Classification Level Classification E-value
Superfamily Alpha-2,3/8-sialyltransferase CstII 0.0262
Family Alpha-2,3/8-sialyltransferase CstII 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) R6D9E7
Sequence length 553
Comment (tr|R6D9E7|R6D9E7_9FIRM) Uncharacterized protein {ECO:0000313|EMBL:CDA81624.1} KW=Complete proteome; Reference proteome OX=1263007 OS=Firmicutes bacterium CAG:176. GN=BN516_00217 OC=Bacteria; Firmicutes; environmental samples.
Sequence
MKLNSFDKVKQLTEEMVAIPSINKEPGGESAVARYIQDFYMSLPYFQAHPEQVKCFQTKN
DFVVRHSTLAYVKGTKGNSNRTVILIGHIDTVGVDDFGTIREYAFRCDELPAKLRETFVL
PQEVIDDIESGEYLFGRGALDMKSGVAGHMYLIQYFSEHPEELDGNLLAIGECDEEDNSK
GIITALDLLEELKEKEHFEYVACINADYSTNYAPGDENRYIYYGSIGKLLPCFAVFGKEA
HVGQAFSALDPNLVLANITRKMSLNTDLCDIAQGEVAIPPISLKQMDTKGPYTVQTALTA
FGYYNFFTHGWSPSIVLEKSKQMAVEAFDETVEYLNAQYKRFCELSKVDFHQLPWKTRVY
TWNEFYNELAAVHGEAFKKAIHEFTVKLHEDDPELDLRLFGLRVVQEAWKWSEDKSPAVV
VFFGSIFSARIEMTGRTAKEKALLDAVESAIEVVRPEAQRQIKTRMFYPYISDSSFMAVC
DDTLAIQALETNMPQYGVKYTHPVDKIRQIDVPVVNIGTFGRDGHMLTERVDMRQTFQNV
PNITYEAVKRLLS
Download sequence
Identical sequences R6D9E7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]