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  Home > Genomes > Uniprot 2018_03 genome > U3JBS0

Domain assignment for U3JBS0 from Uniprot 2018_03 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  U3JBS0
Domain Number 1 Region: 1429-1629
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1e-38
Family Pentraxin (pentaxin) 0.00094
Further Details:      
 
Domain Number 2 Region: 72-255
Classification Level Classification E-value
Superfamily vWA-like 1.67e-38
Family Integrin A (or I) domain 0.00073
Further Details:      
 
Domain Number 3 Region: 2890-2959
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 3.47e-20
Family Complement control module/SCR domain 0.00079
Further Details:      
 
Domain Number 4 Region: 1792-1860
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.5e-19
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 5 Region: 2832-2901
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.78e-19
Family Complement control module/SCR domain 0.00076
Further Details:      
 
Domain Number 6 Region: 2149-2218
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 4.45e-19
Family Complement control module/SCR domain 0.00083
Further Details:      
 
Domain Number 7 Region: 2500-2569
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 4.73e-19
Family Complement control module/SCR domain 0.00094
Further Details:      
 
Domain Number 8 Region: 2716-2785
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.95e-18
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 9 Region: 3240-3309
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.78e-18
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 10 Region: 1850-1919
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.92e-18
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 11 Region: 2384-2453
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 5.13e-18
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 12 Region: 2776-2839
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.12e-17
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 13 Region: 1966-2034
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 6.07e-17
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 14 Region: 2948-3012
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 6.48e-17
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 15 Region: 3299-3365
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.05e-16
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 16 Region: 1687-1750
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.08e-16
Family Complement control module/SCR domain 0.00072
Further Details:      
 
Domain Number 17 Region: 3417-3476
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 5.28e-16
Family Complement control module/SCR domain 0.00096
Further Details:      
 
Domain Number 18 Region: 1908-1974
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000115
Family Complement control module/SCR domain 0.00087
Further Details:      
 
Domain Number 19 Region: 1299-1425
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000000126
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 20 Region: 2558-2626
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000283
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 21 Region: 2268-2336
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000057
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 22 Region: 3123-3187
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000958
Family Complement control module/SCR domain 0.0018
Further Details:      
 
Domain Number 23 Region: 2207-2278
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000133
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 24 Region: 2442-2505
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000195
Family Complement control module/SCR domain 0.00094
Further Details:      
 
Domain Number 25 Region: 3008-3073
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000661
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 26 Region: 2671-2727
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000139
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 27 Region: 3063-3126
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000181
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 28 Region: 372-443
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000236
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 29 Region: 433-500
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000032
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 30 Region: 2327-2392
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000375
Family Complement control module/SCR domain 0.0023
Further Details:      
 
Domain Number 31 Region: 1641-1704
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000403
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 32 Region: 1000-1148
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000585
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 33 Region: 3358-3420
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000347
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 34 Region: 2023-2091
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000472
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 35 Region: 3181-3245
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000139
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 36 Region: 1199-1317
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000129
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number 37 Region: 2088-2155
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000111
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 38 Region: 1746-1789
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000307
Family EGF-type module 0.03
Further Details:      
 
Domain Number 39 Region: 273-426
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000824
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 40 Region: 492-549
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000556
Family Complement control module/SCR domain 0.0052
Further Details:      
 
Weak hits

Sequence:  U3JBS0
Domain Number - Region: 3468-3505
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00021
Family EGF-type module 0.026
Further Details:      
 
Domain Number - Region: 3507-3537
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00027
Family EGF-type module 0.018
Further Details:      
 
Domain Number - Region: 3536-3567
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000768
Family EGF-type module 0.029
Further Details:      
 
Domain Number - Region: 724-786
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00153
Family Complement control module/SCR domain 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) U3JBS0
Sequence length 3575
Comment (tr|U3JBS0|U3JBS0_FICAL) Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 {ECO:0000313|Ensembl:ENSFALP00000000224} KW=Complete proteome; Reference proteome OX=59894 OS=Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis). GN=SVEP1 OC=Ficedula.
Sequence 
MWPLVALCCWGGLSLSLSPSAPQGRAGGQPGALLRAPTFASPSLEAPPLPDTTESKVEKL
GRAFKRQVRRLRARSGRLELVFLVDESSSVGPANFLSELRFVKKLLSDFPVVPAATRVAI
VTFSSRSNVVPRVDYISRRRPQQHKCALLGREIPAIAYRGGGTYTKGAFQQAAQILRHAR
GNATKVIFLITDGYSNGGDPRPIAASLRDLGVEIFTFGIWQGNIRELNDMASHPKEDHCY
LLHSFTEFEALARRALHEDLPSGSYIQEDISHCSYLCEANENCCDIMASCKCGTHTGQFE
CICEKGYYGKGLQHECTACPPGTYKPEGSPGGISTCISCPDENHTSPPGSTSLEDCTCQE
GYRAVGQTCEVVHCPELKPPENGHFVQNVCNNYFNAACGIRCKAGFDLVGSSIRLCQPNG
QWSGSEATCRVRTCPRLRSPQNGHINCSTADISYKTVCFVTCNEGYEIEGNSKLTCQGTS
QWDSKEPKCVEKRCPILQKPAGVTVFPPRCGLEPAVSGTVCQLSCPQGFILSGAREEIRC
ISFGRWNANIQEALCKGLDIEAPQIHCPDNIETVTLEHHNSANISWQVPTAEDNSGEEVS
VHVTPAFIPPFLLPIGEVDITYTATDKSGNEARCTFNVKVIDAEPPVVDRCRSPPPMQAE
NDYPAIWEEPEFSDNSGGPLTVTRSHAPGDLFPKGETTVQYTAVDPSGNNRTCEIHIVIK
GSPCEVSFEPVNGDFICTSDEAGVNCTLHCAEGYSFSEGSSENYYCAYDDGLWRPPYSPE
WPSCSLNRFANHGFKSFEMLYKATRCDDNNLLNSFTDAFQSALGKMVPSFCNDVDDIDCR
LEDQTQKHCLEYNYDYENGFAIGPAGWGAANHLDYSYGDFVDTVQGEDLAKHLPASVKAA
PARVKRHKLNVPMTDQKIKLIFNITASVPLPDERNDTLELENQRRLLKTLETITNRLNRT
LNKEPMYSFQFASELILADTNSLETEKAFLFCRPGSVLRGRMCVNCPLGTYYSLEHLTCE
SCWTGSYQDEEGQLECKSCPSGSYTEYLHSRSISECKAQCKQGTYSPNGLETCETCPLGT
YQPSFGSRNCISCPENTSTVKRGAVDVSACGVPCLAGEFSRTGLTPCYPCPRDYYQPDPG
KSYCLSCPFYGTTTITGARSITDCSSFGSTFSAAEESIMMVPAFPENISKHYKVSSQVFH
ECFLEPCHNNGTCKQLGSGYICICPLGYTGLKCETQVDECKSSPCQNNGICKDGIGTFVC
HCQPGYSGLLCEEDINECSSSPCLNGAHCTDGKNGYRCTCAKGFTGDRCEREMNECLSNP
CLNRAVCEDRVGSFSCKCLPGFTGVLCERNIDECLSRPCRNGATCRDGINSFRCLCVTGY
TGVSCEVNINDCASSPCLNQATCVDALNSYVCKCPPGFTGSRCETEQSSGFNLDFEVSGI
YGYVMLDGVLPSLGDITCTFWMKSTDTTNYGTPISYAVENGSDNAFLLTDYNGWVLYVNG
REKITDCPSVNDGNWHHIAVTWTCTDGAWKVYIDGKLSDGGSGLSVGSKIPGGGALVLGQ
EQDQKGEGFNPAESFVGSISQLNIWDRVLSPQQVESLATSCPEELQKGNVLAWPDFLPGV
VGRVKIDYKSIFCADCPSLQGSIPHLRASSADLKPGSKVSLSCDPGFQIVGNSVQHCLNL
GQWTRPFPRCERISCGVPPTLENGFYSAEDFFAGSTVTYHCNSGYYLLGDSRMLCLDNGS
WNSISPSCLDVDECAVGSDCDEHASCLNTNGSYVCTCIPPYTGDGKKCAEPVKCRNPGNP
EHGYLYGDTYSVGSRVTFSCEEGFQLTGATELTCLESGEWSHPVPYCEAISCGAPVIPEN
SAIFGSNFTYHNKVVYRCNDGYNLVGEKEILCLASGIWNHAPPSCEMVMCPSPQDISNGK
YTLSGTAYLSSVSYTCDNGYSLQGPSVLVCASSGNWNSTPPACNIVSCGSPPAIKDAVIN
GNNFTFGNTVSYACKEGYTLVGPETIECLASGKWNVSHQQCLAVSCDEPPHVENASPESG
HRLFGDIAYYFCLDGYSLADNSQLLCNAEGTWVPPEGRDMPHCIADFCEKPSTVSYSILE
SISKAKFAAGSVVSFKCMEGFVLNTSAKIECLRGGQWNPSPLSIQCIPVRCGEPPHISNG
YASGANYSFGAVVAYSCNKGFYIKGEKKRTCEATGNWSGSLPTCHPVSCGEPPQLENGFI
KDTTGHFFENQANYQCDSGYQMVGSPVFICQANRQWYSESPPHCAPLSCGKPPSIPHGYS
KGETFDMGSKVDFFCDEGYELIGDVSWTCQKSGKWSKRQNPKCVPTKCPEPPLVENQLVL
REVSYQVGVVQFSCKEGYVLHGSSILKCLPSQQWNDSFPFCKVVQCSAPPYIPFGDPLTS
SLHFGSTVKYMCVDGFLMKGESTIRCQADGSWSLPLPECIPVECPQPEEIQNGIVDVQGL
TFLSTALYTCKPGFELLGNTTVLCGEDGQWLGGRPVCKPIQCPRPKKILNGKYSFTSFHY
GQTVRYFCDRGFQLQGEETLRCLETGEWSTEAPSCKAINCQPPQPIENGFVEGADYSYGA
MVIYSCVPGFQLSGLAMQTCEELGWSSSTPTCLPTDCGLPPHIDFGEYMQLRQGERRSDQ
ESVTENPSLSHMLLAENVRDFKSSLKEDSAMQLTTFLFGTIILYTCYSGYELLGNPVLAC
QEDGAWNGTAPACVSIECTLPSAPENGFLHVTENTLGSAVRYTCRPGFTLVGSDTRLCLP
TRQWSHTAPYCKAVTCGSPTQLLNGKITGGNYTYGSVVYYECDPGYQLNGPAERRCQESQ
KWDGSEPICIPVSCSPPPVLENGQVTGEDYTYQRHTEYSCNEGFLLDGDRSRVCLANGSW
SGITPVCKAVTCPAPLPLPNGSTAGSDFSFNKEVHYRCNDGYSLQGASTLTCQSDGTWDP
EAPHCEPVICGPPEDISHGFLNGSAFTYGEFVHYICFPGYELHGNPLRQCLSNGSWSGSL
PSCLPCLCPTPQIQNGVVLGTDFSCGTSVQFQCLEGFKLLGPSEVTCEAAGKWSSGFPRC
GQISCGAPPIIPNTFINGSSSEDENTIIYTCLTGFVMKGAPELTCVETGVWKKPYPSCEL
LSCGPPPSIPNAEVLGNTYTYGSKVQYRCLEGYTMATDVDVCTCQEDGQWSPQSISCCPR
KCPLPGNITNVIALGNNFTVNTSITLSCVEGYTLVGASTSTCKENGVWVPPFSDDICSPV
SCGTPESPEHGFVVGTKYNYKDVSIYKCDSGYELQGDAERTCQEDKLWSGTVPVCRKTRC
KIPVSLLNGKAIYENNTVGSTVTYLCERGYSLEGEAAAECTRDGRWSNPLPLCKPNPCPV
PFVIPENALLSEVDFHVGQNVSIRCREGYQLKGQSVITCNADETWTPATAKCEKISCGPP
AHVENALVRGSFYQYGDMITYSCYSGYMLEGPLRSICLENGTWTTPPTCKAVCRFPCQNG
GVCERPNACSCPDGWMGRLCEEPICILPCLNGGRCVAPYQCDCPLGWTGSRCHMAVCQLP
CLNGGKCIRPNRCYCPSSWTGPDCSRKRKAGFYPF
Download sequence
Identical sequences U3JBS0
ENSFALP00000000224

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.