SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXETP00000037057 from Xenopus tropicalis 69_4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXETP00000037057
Domain Number 1 Region: 2272-2460
Classification Level Classification E-value
Superfamily BRCA2 helical domain 1.11e-69
Family BRCA2 helical domain 0.000000346
Further Details:      
 
Domain Number 2 Region: 2624-2762
Classification Level Classification E-value
Superfamily BRCA2 tower domain 6.02e-49
Family BRCA2 tower domain 0.0000151
Further Details:      
 
Domain Number 3 Region: 2848-2984
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.83e-44
Family Single strand DNA-binding domain, SSB 0.0000925
Further Details:      
 
Domain Number 4 Region: 2461-2594
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.54e-41
Family Single strand DNA-binding domain, SSB 0.0000044
Further Details:      
 
Domain Number 5 Region: 2595-2624,2764-2847
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.43e-34
Family Single strand DNA-binding domain, SSB 0.00025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000037057   Gene: ENSXETG00000017011   Transcript: ENSXETT00000037057
Sequence length 3202
Comment pep:known scaffold:JGI_4.2:GL172716.1:1071058:1096238:-1 gene:ENSXETG00000017011 transcript:ENSXETT00000037057 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAPQLGKSVFYDLFSTHCSHSDLGPISLNWFEELTAEALPYKSRTCEDHECSLDDLHEN
NIKTPKLKSSIYSQLDSTPVIFKERLLSPLFASSLTELDKRQNATDNGNNVRLEKSNCTQ
MQHQASEVFSPSSRCLNESPAVIKEIFKTPLRNKYLHKTPQCDWKPDICSSLFCTPKLMK
NQTGCIKESLGAEVDPEMSWSSSLATPPSPTVIIAHANDQPSGNKHAAIVQSLFPNCENM
EANNLPPPETGTQNEDRQICAGLEKPGSCSASKTVPEASAISSRAAWKKTVANTVKDEEV
SRTVENALEGMEDVLSIFFASEKTPGLRKLKNSTQARRKVESIKSQKCQVSLFKAEEGES
ILVPLDEHHKCDHEMLMKPEQDYKMNAVNQKIAKETTPYEWSQLNICELDITQSQDSTLH
AANLCCEDITVNKSDTCNITEAEKQEEVNEPSTDNVLSNKVGKESTLNVNCINADLNNMA
SSSNNSVHSLNLSQCEKMDSSEISNSEVGCITKLTTHPAKITTGELSSVDDCAKKPQERV
TISTSFSTLKKQSKFMYSVNTVLTGHIASNTSIATRRSLNSHLSSDEPKPHIKENQNEPE
SNAKYYSNGLQKPVFLEKENDNKGISLCKTISDGQNTSEGARAPDYFEERVPETKDRCKA
TLSIREKVVATANCFARKQLETDYPEDASAQHEALQFHAKQYVSCSMLNSNVSNDMQIKP
QVLTQACDFRSSAENLVEKTKNQLRRNEDQSFSSTGIGKKPASGEKLVGDCNEGSFLHVK
QEISAAQALVGNGYETRDTPDVTSDHTRSVISNHGKSLWEEETALTELPVPEILSKTFKG
FKTASNKKIHISDKNIVKGCDLFKEIEFGIGDAKPCNEENKEPLKKTPFDVPGYETNLKG
FKTASNKEINVSENKFAKGRLLFKDIEEESGQTTAIMAKDNELFIKPASSNKPDIFKSTC
IKGMNPSENLDSMPPKKGDVQQSAGLKHSDQIDVFGFDDPPAKGNVQTLGYFNMSASETD
FKGFKTASNKDIIISESTLAKGKLIFEDIEDTRYSETGRTIDCKAKGGALSTSNLVMHNT
MCKNEPSTSENTNDKAPKRAKVQTPMAENSHLKEPSSDKNAMDAANHQMTLKASAYSPKA
ASSALPRYKKKPISTTKTSFQLNEHLTESQQAEISELSSILENADSQFDFTQFRKVPSVT
EKQNSTEGGSESQNLNNSDVWKDVDFNDSFAAGRDHSEGMEAIPSSPGIKELPSAGECCS
KETHDSMPDFVTLAPKQGFLVKQNERLFAGFNLASGKQVNIDNDVLKKAAELFNDIDNDK
ELLSHAKEESRKSNIKHSSKLINNENCGKTEHTSEHLVCQSNVSLPFIKTLGKNATILVS
GNEKSQNQELQLDCLKCESTDVKHTPQKETINDNSKCNESSLSELSMKGFQTASGRNIMM
SESSIQKARNIFAEEHEDSFTLRCNIQNTIQIPQPVNEPTQFPYVNLGPKPTTTSGWQEK
NILRRSTEKGFMPGFCTAGGKKVSVSDNSLAKAHKLFQEECTFSKEGKLDEVKQNKLMNS
EPLSLLTCESVLKQSDGFIEDISTSRNALEIRPELYPEGMCSNRASNGSGNNSEFTAGEG
ISININQSSLLTTGNVLKNLPSESSGHDVYSVTEHLSTVVKVKRYNDSGHFVNQNLAECN
DNHVLSTQKNTANISNRNEDCTSLAPLSFSTASGKSVTVSHDSLQKARLMLSEAANDVTV
DTSKQEAAYITPAIRKTEAEKEQNTVDDSDRVNANTFSFSTASGKKVNISGNSLKQVRAV
CLSSDPKETSAALFNVEKSVFNEDVKDVSLLQPNVTMPKAVSFSTASGKTVQLSDESLKK
ARVIFSEIDTCPLMQQQTNESTVEEIVIGGGMTKSKQMPLTTEKVETTRKNNGTFGFNTA
SGKQVSVSESALQKVKDIFQEFDDPDNYEQNKSLVRLPVSSKIKESTPGTKRLVQTAGSS
YKNDNLQCKAGNLRTFQDKQAGKKSLTYSEAAISPIESSVPIYEMQVMLKHTNNQACKYQ
PRVEVPLQDQRWQNILEIELPATCAPAFRETHNILFFGDLQHSTHFDICSLYSGKNPAVK
HQLASHSKMQTLVISGRDSSGTLTLQFTLRIVILHTVNNQYSLNKQLFTFSSALRQVTCI
PTQAHLHSKVKIFHQSLPIKSPDVASDSTSKSYSPTAAKETINCSSASKIPAKKFVPPFK
KTVATLADNQSNSVQNGSSDGLIESIVYPKEDKVETICSSKDQFDDSDILQMTSNLRCSK
DLQEMRIRKKLRQKIKPHPGSLYRLKMSHVKRISLQSAVAERCPTLYSREQLYRYGIVKN
HIGVSSENALSFQFHCSNYFTKELLLSGNGVQLADGGWLIPTEQGNAGKEEIYRAFCDTP
GVDPKLISAEWVHNHYRWIVWKLAAMEVRFPKTFACRCLTPERVLLQLKYRYDVEIDKSQ
RSAIKKIMERDDSPAKTLVLCIAKIISQGTRLPNACSNKTEPADSKESSAVIEVTDSWYG
IKVLLDPCLTALLHKGRLFIGQKLIVHGAELIGSDDACSPLEAPESLMLKIAANSTRPVR
WHTKLGYFKDPRPFCLHLSSLLSEGGVVGCVDVVIQRIYPMQWMEKMANGLYVFRNDRAE
EREAEKHSANQQKKLEMLFSKIQAEFEQREVTCNRRKGLRRRSLNAQQMQTLQDGAEIYE
AIQNESDPGYLESYLSAEQLKALNHHRQLLNDKKQALIQAEFRKAIECSEQDANGCTRRD
VTPVWKLRIADYRNYETDAAYILNIWRPLPDVLSLLKEGCRYKMYHLAASTSKGKSLAAD
LQLTATKKTRFQQLQLSESILEQIYSPREVTDFSRFQEPLFSAPYAEVDLVGLIISIYKK
TGAAPVVYISDESHNIVALKFWTDLGQLGLEEITKPRTYISASNLRWRSDCIEGIPTLYV
GDLANISSNPKESHLQRAIQKLKLSVQNVQDFWNSSQTALMKTLQINSTDTTECSKNPTT
PTWKSDVSARSGYLTPLHHSGKRLLNSVHTSDPQTENPGCSKEIQLKTCKKRKALDFLNR
IPSPPPVTPVRPFVSPSLQKAFRPPRSCSVQKLGPETKGNTENVQGTTPECTKDLAKLEG
EFVADEELAMINTQALLLGLEEEKKKTEQKTSRTAGKMTAHESPIENASPVPAQEQQTEE
ALNIPVGNSEKSYLCLRKRKRK
Download sequence
Identical sequences F6RE00
ENSXETP00000060681 ENSXETP00000037057

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]