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Home > SCOP hierarchy > Domain combination - 49785,_gap_,48371,_gap_

Domain combinations for 49785,_gap_,48371,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49785 - Galactose-binding domain-like
48371 - ARM repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Tupaia_belangeri_76 (Northern tree shrew) 1

Gallus_gallus_76_4 (Chicken) 1

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_76_1 (Coelacanth) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Adineta_vaga 1

Trichoplax_adhaerens_ 1

Theobroma_cacao_B97-61/B2_v1 (Cacao) 1

Cucumis_sativus_v122 (Cucumber) 2

Malus_domestica_v196 (Apple) 1

Prunus_persica_v139 (Peach) 1

Vitis_vinifera_ (Wine grape) 1

Mimulus_guttatus_v140 (Spotted monkey flower) 1

Triticum_urartu_22 0

Triticum_aestivum_22 (Bread wheat) 2

Aegilops_tauschii_22 0

Oryza_barthii_22 (African wild rice) 0

Oryza_meridionalis_22 8

Oryza_glumaepatula_22 3

Oryza_punctata_22 1

Oryza_nivara_22 1

Oryza_brachyantha_22 (Malo sina) 1

Panicum_virgatum_v202 (Switchgrass) 1

Setaria_italica_v164 (Foxtail millet) 3

Musa_acuminata_22 (Wild Malaysian banana) 1

Amborella_trichopoda_22 1

Physcomitrella_patens 0

Plasmodium_falciparum_3D7_ 1

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Strains
Genome Number

Hordeum_vulgare_22 (Domesticated barley) 1

Plasmodium_falciparum_HB3_ 1

Longest transcript per gene
Genome Number

Tupaia_belangeri_69 (Northern tree shrew) 1

Gallus_gallus_69_2 (Chicken) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_69_1 (Coelacanth) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Others
Genome Number

Malus_x_domestica_(Duplicate) (Apple) 1

Uniprot_2018_03_genome 963

NCBI_2017_08_genome 159

Protozoadb_2010_08_(Protozoadb) 2

STRING_v9.0.5_(STRING) 5

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