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Domain assignment for GSADVT00044394001 from Adineta vaga

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GSADVT00044394001
Domain Number 1 Region: 1-130
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 2.34e-34
Family N-terminal domain of xrcc1 0.0001
Further Details:      
 
Domain Number 2 Region: 580-669,900-984
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 8.88e-29
Family Canonical RBD 0.0022
Further Details:      
 
Domain Number 3 Region: 165-254
Classification Level Classification E-value
Superfamily BRCT domain 3.63e-23
Family DNA topoisomerase II binding protein 1, TopBP1 0.048
Further Details:      
 
Domain Number 4 Region: 483-565
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.26e-22
Family Canonical RBD 0.0013
Further Details:      
 
Domain Number 5 Region: 295-389
Classification Level Classification E-value
Superfamily BRCT domain 9.16e-16
Family DNA-repair protein XRCC1 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSADVT00044394001
Sequence length 996
Comment pep supercontig:AMS_PRJEB1171_v1:HG381020:203380:208040:1 gene:GSADVG00044394001 transcript:GSADVT00044394001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPLIHLKKILSCSSEDQIHCAQNLLNPDQSNKWFSSKKPEERITCIIEFDKPSCISSIDI
DDWTMLLPSTLFMTPKESRTNQNNQQIKSLKSFHLNKVTLNKKWNRLKIICEQKFNRDIP
FGLNFIKLYSNDDHQIEDETDIEQKQIQLERKSKITSKDNQNDKNTQIMKNVVFVLSGFQ
NPLRSELRNKATAMGAIYNDDWNEKCTHLILAFPNTPKFIQVQKAGNGFIVNQQWILDCH
KQDRFLSESSYEFSETRKRKKQDEEESIETKKPPMKKKSLNKKEEKEAKKLKLGELPDFF
HEKHFYVSYGDYNDNTLLDITRVILAYDGILERQITNDVTYVITNRMWNHDFEKISKSNP
EINFVNLDWIQDCHNENQFVPIQTYLIKKYSKENVPRLPRELTPFAPFSAPIELDQRGPL
FKGPGSKRDTGRYKVRSADDENVKRAKKFAMEQSVKYVLMKQQQHQQRTQLDILKKQQAL
LLMCRIYIGSINFELNEAMLKQAFQPFGPVKAVSLTFDPVTNRHKGFAFLEYEIPEAAQL
SIEQMNGVILGGRNIKVGRPSNMPQAQPIIDQLTEEAKNYNRIYIASIHPDLSETDIQSV
FEAFGEIKSCALSKDTATSKHKGYGFIEYGTVQAAQDAISAMNLFDLGGQHLRVGKAITP
PEGLFASAQPIASPMPTATALAVATITAQLQAKDVETNPQPTVVASQLITNPLAQVSFAT
GPIAPTTVAAALSAASFSGATAVTSMISNIINPTAVMSSSIPQPTLVASPTIRPNFPIAT
GSSPSLVQPIPISSPQLIIPPPPTLLEEPPIPVGLKTALESSPQQQQQQQQQQQQYASIA
LVLPSDKTDTNVTKKAALDLQNAEDPSTTLSQQEELSVKGREQRHLLMQKLNQRRLDSRV
CVLKNMVGPDDVDDDLQQDVTDECSKYGEVVKVVIYTEQQGEDDNAEQIVKIFVEFRTSK
QAEKTVESLNGRYFAGRVIKAEMYDQTAYQTDDLSG
Download sequence
Identical sequences GSADVT00044394001

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