SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000002077 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000002077
Domain Number 1 Region: 272-588
Classification Level Classification E-value
Superfamily WD40 repeat-like 4.71e-40
Family WD40-repeat 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000002077   Gene: ENSFALG00000001999   Transcript: ENSFALT00000002089
Sequence length 629
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603391.1:368338:395169:1 gene:ENSFALG00000001999 transcript:ENSFALT00000002089 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEVLPVQEESDLEKKRREAE
ALLQSMGLTPESPVVPPPTSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHS
DSDLGRGPVKLGMAKITQVDFPPREVVTYTKETQTPVMTQPKEDEEEEDDVVAPKPLVEP
EEEKTLKKEEEEEAAPHELTEEEKQQILHSEEFLSFFDHSTKIVERALSEQINIFFDYSG
RDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEP
DGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHKQS
KAVAVTCMSFPIGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGINCHAAVG
PVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRL
DLWNLNNDTEVPTASITVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRGD
EWTRFGRTLAEINANRADAEEEAATRIPA
Download sequence
Identical sequences U3JH23
ENSFALP00000002077 XP_005049394.1.66865 XP_016155229.1.66865

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]