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  Home > Genomes > Ficedula albicollis 76_1.0 > ENSFALP00000003872

Domain assignment for ENSFALP00000003872 from Ficedula albicollis 76_1.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSFALP00000003872
Domain Number 1 Region: 1840-2086
Classification Level Classification E-value
Superfamily Ankyrin repeat 9.5e-53
Family Ankyrin repeat 0.0000000566
Further Details:      
 
Domain Number 2 Region: 869-1000
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000455
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 3 Region: 599-730
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000141
Family Growth factor receptor domain 0.0085
Further Details:      
 
Domain Number 4 Region: 417-541
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000361
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 5 Region: 1034-1072
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000013
Family EGF-type module 0.0041
Further Details:      
 
Domain Number 6 Region: 213-348
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000282
Family Growth factor receptor domain 0.0095
Further Details:      
 
Domain Number 7 Region: 1104-1239
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000455
Family Growth factor receptor domain 0.015
Further Details:      
 
Domain Number 8 Region: 537-579
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000023
Family EGF-type module 0.0053
Further Details:      
 
Domain Number 9 Region: 762-798
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000447
Family EGF-type module 0.0031
Further Details:      
 
Domain Number 10 Region: 993-1035
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000858
Family EGF-type module 0.0044
Further Details:      
 
Domain Number 11 Region: 1234-1286
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000947
Family EGF-type module 0.009
Further Details:      
 
Domain Number 12 Region: 1073-1116
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000123
Family EGF-type module 0.022
Further Details:      
 
Domain Number 13 Region: 1317-1360
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000196
Family EGF-type module 0.015
Further Details:      
 
Domain Number 14 Region: 150-192
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000264
Family EGF-type module 0.011
Further Details:      
 
Domain Number 15 Region: 71-109
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000621
Family EGF-type module 0.014
Further Details:      
 
Domain Number 16 Region: 1276-1320
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000159
Family EGF-type module 0.0079
Further Details:      
 
Domain Number 17 Region: 340-380
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000025
Family EGF-type module 0.019
Further Details:      
 
Domain Number 18 Region: 844-881
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000279
Family EGF-type module 0.016
Further Details:      
 
Domain Number 19 Region: 1445-1476
Classification Level Classification E-value
Superfamily Notch domain 0.000000353
Family Notch domain 0.0015
Further Details:      
 
Domain Number 20 Region: 1523-1554
Classification Level Classification E-value
Superfamily Notch domain 0.000000379
Family Notch domain 0.0034
Further Details:      
 
Domain Number 21 Region: 116-149
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000438
Family EGF-type module 0.012
Further Details:      
 
Domain Number 22 Region: 382-424
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000625
Family EGF-type module 0.022
Further Details:      
 
Domain Number 23 Region: 1399-1435
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000161
Family EGF-type module 0.021
Further Details:      
 
Domain Number 24 Region: 721-762
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000205
Family EGF-type module 0.033
Further Details:      
 
Domain Number 25 Region: 32-70
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000746
Family EGF-type module 0.027
Further Details:      
 
Weak hits

Sequence:  ENSFALP00000003872
Domain Number - Region: 1486-1517
Classification Level Classification E-value
Superfamily Notch domain 0.000667
Family Notch domain 0.01
Further Details:      
 
Domain Number - Region: 1359-1396
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00477
Family EGF-type module 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000003872   Gene: ENSFALG00000003644   Transcript: ENSFALT00000003888
Sequence length 2475
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603197.1:10313042:10397742:1 gene:ENSFALG00000003644 transcript:ENSFALT00000003888 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
LPEIRGPQQYMLQQILNRWCCSAVLGTSRALQCMDDSKPCVNEGKCIPYQNGTGYCKCRE
GFLGDYCQYRNPCESNTCKNGGTCEAASLIGKPTCKCAPGFTGEECQYSESHLCYVSQPC
LNGGTCHPHGQDAYECVCLPGFTGKECQWIDACTSQPCANGSTCTVSGNKFSCSCLAGYT
GQKCEIDVNECATAGLCQHGGTCVNLPGSYRCQCKPGYTGHRCESVYVPCSPSPCMNGGT
CHQTSDFTFECNCLPGFEGTVCGHNVDDCPNHKCLNGGVCVDGVNTYNCRCPPQWTGQFC
TEDVDECQLQPNACQNGGTCTNHNGGYACVCVNGWSGDDCSKNIDDCFTASCANGSTCID
RVASFSCICPEGKAGLLCHLDDACVSNPCQKGALCDTNPVNGNYICTCPQGHKGADCTED
VDECAMANSNPCEHAGKCVNTEGSFHCECLKGYTGPRCEMDINECHSNPCQNDATCLDKI
GGFTCLCMPGFKGVHCEEDIDECLSNPCVNNGVCLDKVNRFLCVCPPGFSGAVCQIDIDD
CSSTPCLNGAKCIDHPNGYECQCATGFTGLLCEENINNCDPDPCHHGECQDGIDSYTCIC
NPGYMGAICSEQIDECHSNPCLHQGRCIDLVNGYQCNCLLGTSGVNCENNFDDCASNPCI
HGDCIDGINRYNCACKPGFTGPRCNTDIDECTSSPCHNGGTCVNEVNGFRCVCPEGFHHP
HCQPQADGCLSSPCAHGNCTHTATGYKCVCDPGWIGDYCSTEGNECKSNPCQNGGTCEDL
LNGYRCTCRKGFKGENSENNGILSKSLSKPCLNSSSKKRQALSSTFFCFFPFCSAGVNCQ
VVVSPCSPNPCENSGICQESPDSEGYSCQCAPGWEGERCTVDIDECLSKPCKNHALCHNI
QGSYLCECRPGFTGGDCDSNIDDCLANPCQNGASCVDGINSFSCICLPGFHGDKCQTDTN
ECLSEPCRNGGTCTHFVNSYTCKCPPGFEGTNCEINIDECTDSSCFNGGTCVDGINSFTC
QCPLGFTGTYCLTEINECASSPCLNRGTCVDSLGTYRCICPLGYTGKNCKSVVDLCSKSP
CKNRGTCVQTLAQTRCVCPPNWTGAYCDVPNVSCQVAASQRGVPVDQLCQHSGHCLNVGN
THHCQCQVGYTGSYCEVQLDECDSSPCQNGATCRDHLGGYQCECVAGYQGVNCEYEVNEC
QFQPCQNGGTCIDLVNRFKCSCPPGTRGHLCEENVDDCISDSGDPRCFNGGQCIDQIGGY
SCLCPQGFAGERCEGDINECLSNPCNPRGSLDCVQLTNDYRCICRSAFTGRHCESVIDVC
PRKPCQNGGTCAVASNMPDGFICQCPPGYSGAKCEFSSHSTCGQVKCKKGEQCIQTSSGP
RCYCPKLSVGEECQTNLGCASAPCQNGGSCHPHPQPPYYYCQCPAHTQGSHCEQPVTFSP
EPRGCLDSQCAEKARDGYCDEDCNTHACQWDGGDCSLKMEDPWANCSSSLRCWMLFNGQC
DEFCNTPECLFDNFECQQNSRTCKYDKYCADHYADGRCDQGCNSEECGWDGLDCAGDKAE
KLAEGTLIIVVLMPPDELLEDVRSFLRTLGTLLHTNLRIKLDSQGNPMVFPYYGEKSAAR
SRRSLVVVRKHRELEQEVIGTKVFLEIDNRQCAEDSEQCFHNTEAAAALLAAQAIKGMLP
YPFVSVQSEPLLPPKTQLLYLLAVAALIILLILLLGVMMAKRKRKHGSLWLPEGFILRRD
PSNHKRREPVGEDAVGLKNLTVQIPEGNLADPGTTEHWAGDGGPQPKRAKAEDQALLPEG
DEQIDQRQWTQQHLEAADVCGSTSLALTPPQADQEVDVLDVNVRGPDGCTPLMLASLRAG
GSDISEDDEDGEDSSANIITDLIYQGANLQAQTDRTGEMALHLAARYSRADAAKRLLDAG
ADANARDNMGRTPLHAAVAADAQGVFQILIRNRVTDLDARMNDGTTPLILAARLAVEGMV
AELINCQADVNAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAARE
GSFEAAKILLDHFANRDITDHMDRLPRDVAQDRMHHDIVQLLNEYNVAHSPAGHPGAMLN
SALSPVICGPNRSFLNLKHASLSKKSRKPNAKGMPTSLTKDAKRRRKKSLSEGKGQFSES
SVTLSPVDSLESPHAFASEPTSSPVMPSPGVLHSSPSSLLAAPSVQPAHAMSFSNLHELQ
PLGRGSGTVLPSVSQLLSQHRTTPPNSGLGRLRPGNVSGEWMNRMEVNESQYNEMFGMVP
QVMHSHPGVSQQGGLVQAEAKHLGVSRESLPPIMTFQLVPKGSINQQALPQQAQSNCAQN
MAGPLGSMYQIPDLAQLPSASFSMAAIPQQDGQVAQTVLPAYHQFQSSMGKYPTPPSQHS
CYSSATERTPSHNRHLQGEHPYLTPSPESPDQWSSSSPHSASDWSDVATSPGNSQRGPAA
AHMPEQQRSNMQVYA
Download sequence
Identical sequences U3JM68
ENSFALP00000003872

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.