SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000008401 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000008401
Domain Number 1 Region: 16-337
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.14e-47
Family WD40-repeat 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000008401   Gene: ENSFALG00000008056   Transcript: ENSFALT00000008439
Sequence length 341
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603179.1:6855922:6885796:-1 gene:ENSFALG00000008056 transcript:ENSFALT00000008439 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSQGPKTQRLTVLMALPPPDPQFVLRGTSAPVHTLHFSCGGPEPDIPLLFSGSENGFIHV
WNLKTHRVDTALDGHGRKSVYCVETMGGKDRLLSQGRDQRICLWDLAEGRTSVTDSVFTE
HMGFCRCSLLKVAQGRWLMAMAARSLEEVQILELPSKTSVCTLKPEVGAKLGMPMCLKLW
QLSCGSQPVLLAGYEDGSVVLWNVSMGKALSQLSCHQEPVMSLDFDSEKAKGISGSSEKV
LSIWCLNEQQNLQVYKTHELVNAGISDITIRPDKKILATAGWDHRIRIFSWKKLKPLAVL
DYHTATVHCVSFSDHSSPWDRLLAAGSKDQRISVWSIYAQT
Download sequence
Identical sequences U3K047
XP_005054982.1.66865 ENSFALP00000008401

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]