SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000010636 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000010636
Domain Number 1 Region: 64-369
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.65e-29
Family WD40-repeat 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000010636   Gene: ENSFALG00000010192   Transcript: ENSFALT00000010678
Sequence length 881
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603174.1:17566072:17580651:-1 gene:ENSFALG00000010192 transcript:ENSFALT00000010678 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSGSKPDILWAPHHVDRFVVCDSELSLYHIDSAVSSELKAGSLRLSEETTATLLSINSDT
PYMKCVAWYPKYDPECLLAVGQANGRVVLTSLGQDHNSKSKDLIGKEFVPKHARQCNTLA
WNPLDSNWLAAGLDKHRADFSVLIWDISSKYAPETAVATEKVRLSAGDAEAGLVVTKPLY
ELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKIFVNTKAVQGVTVDPYFHDR
VASFYEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRTGLLATLTRDSNIIRLYDMQ
HTPTPIGDETEPTIIERSVQPCENYIASFAWHPTSQNRMVVVTPNRTMSDFTVFERISLA
WSPVTSLMWACGRHLYECTEEGKASSLEKDIATKMRLRALSRYGLDTEQVWRNHLLAGNE
DPQLKSLWYTLHYMKILMKQYTEDMDQKLTGNKGPLVYAGIKSIVKSSLGTTENLRHSRS
GSDRQADIIQYLSEERSLALQLCGWIKKGTDLDVEPFLNSLEQEGDWERAAAVALFNLDI
RRAIQILNKGASSGKGDLNLNVVAMALSGYTDEKNSLWREMCSTLRLQLNNPYLCAMFAF
LTSESGSYDGVLYENNVAVRDRVAFACKFLNDAQLNRFIEKLTNEMKEAGNLEGILLTGL
TKDGVDLMESYVDRTGDVQTASYCMLQGSPSDVLKDERVQYWIENYRNLLDAWRFWHKRA
EFDIHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSAIPHQGRGFSQYGVSGSPTKSKVTS
CPGCRKPLPRCALCLINMGTPVSSCPGGSKSDEKVDLSKDKKLAQFNNWFTWCHNCRHGG
HAGHMLSWFRDHTECPVSACSCKCMQLDTTGNLVPAETVQA
Download sequence
Identical sequences U3K6I2
ENSFALP00000010636

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]