SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000013663 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000013663
Domain Number 1 Region: 52-86,115-217,402-603
Classification Level Classification E-value
Superfamily WD40 repeat-like 5.86e-22
Family WD40-repeat 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000013663   Gene: ENSFALG00000013092   Transcript: ENSFALT00000013719
Sequence length 668
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603195.1:1322351:1329257:-1 gene:ENSFALG00000013092 transcript:ENSFALT00000013719 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
APRPGLPPDTANALLASGPDGEMLWLDVTHRPGQAPWVRLMGRYLLPPCKQRWHTCAAFL
PQEELLVCGDRRGSLLLFPCSSSSGGATAPVEDSSNELEPSCLLHKAALPLESPLSVLFG
LHGKTGVTSVTIHGGYIYSTGRDGVYRQLRLRDQQLEVLQKHRPSKGLLWIEELHFTSDG
DLLVLGFHADNFVVWSSRTGENVHCIPCGGGHRSWSYCSSPLVKVFAFIKSGDVMLYHCE
AEPCEQQVLLPSLHGREITCVRRLGAVEVPGHATVNLFVTGSEDTTACVLVLSENSRAAV
PLARLSDHISSVRTLAVAMRPGDEGFGDEGLSALLFSAGGRAQIECYRLLCAGDAASESA
VACQVIHVASHRLDKHWEKKKNRHKLVKMDPETRYMSLSVVPGTSTKQLPTPWKFLAAAC
SDGSVRIFGLLEAAQKFMLVAESFHHQRCVLKVEAFLHTWAEGERRQLLCSAATDGSIAF
WDITGPIMDAADALHQAEGEMQPLALGAPLVTIMAHSCGVNSLHIRETPEGQHLVASGSD
DGSIHMCLLEVALGRGEAAAGTCLQVLERVSRPCAHAAHVTGIRVLQPELLLSASVDQRL
TLWKRCPGELVPLSTTFFHVPDLAELDCWEVVEAGGELRYYCVLCGQGLEMVCGTASCKP
SPPQEAPQ
Download sequence
Identical sequences U3KF59
ENSFALP00000013663

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]