SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1ldjA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1ldjA
Domain Number 1 Region: 1-38,69-395
Classification Level Classification E-value
Superfamily Cullin repeat-like 5.33e-174
Family Cullin repeat 0.000000000113
Further Details:      
 
Domain Number 2 Region: 397-670
Classification Level Classification E-value
Superfamily Cullin homology domain 3e-105
Family Cullin homology domain 0.0000000000944
Further Details:      
 
Domain Number 3 Region: 671-760
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 5.31e-30
Family SCF ubiquitin ligase complex WHB domain 0.00000751
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1ldjA   PDB: 1ldj
Sequence length 760
Comment (A:)
Sequence
ldqiwddlragiqqvytrqsmaksrymelythvynyctsvhqsnqargagvppskskkgq
tpggaqfvglelykrlkeflknyltnllkdgedlmdesvlkfytqqwedyrfsskvlngi
caylnrhwvrrecdegrkgiyeiyslalvtwrdclfrplnkqvtnavlkliekerngeti
ntrlisgvvqsyvelglneddafakgptltvykesfesqfladterfytresteflqqnp
vteymkkaearlleeqrrvqvylhestqdelarkceqvliekhleifhtefqnlldadkn
edlgrmynlvsriqdglgelkkllethihnqglaaiekcgeaalndpkmyvqtvldvhkk
ynalvmsafnndagfvaaldkacgrfinnnavtkmaqssskspellarycdsllkksskn
peeaeledtlnqvmvvfkyiedkdvfqkfyakmlakrlvhqnsasddaeasmisklkqac
gfeytsklqrmfqdigvskdlneqfkkhltnsepldldfsiqvlssgswpfqqsctfalp
selersyqrftafyasrhsgrkltwlyqlskgelvtncfknrytlqastfqmaillqynt
edaytvqqltdstqikmdilaqvlqillkskllvledenanvdevelkpdtliklylgyk
nkklrvninvpmkteqkqeqetthknieedrklliqaaivrimkmrkvlkhqqllgevlt
qlssrfkprvpvikkcidiliekeylervdgekdtysyla
Download sequence
Identical sequences 1ldj_A 1ldjA

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