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Domain assignment for Pa_1_12150|chrm1_SC2|Putative from Podospora anserina

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  Pa_1_12150|chrm1_SC2|Putative
Domain Number - Region: 139-151,246-325,450-533
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00179
Family WD40-repeat 0.035
Further Details:      
 
Domain Number - Region: 75-205,466-537
Classification Level Classification E-value
Superfamily Tricorn protease domain 2 0.00392
Family Tricorn protease domain 2 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Pa_1_12150|chrm1_SC2|Putative
Sequence length 1081
Comment mediator of RNA polymerase II transcription subunit 16
Sequence
MSAHDMSLLGGDSMSIDSGIQVMQSIQGMDGAMALDDVDLFGDPVMDNALGTLPLTSRPP
PSKQLQQRLDQLRARGCCQGIAWGRLGNIACVSKDGMSVDIRYMRCNPENGEWDMNDPSS
SATISLVHGPPSFISLPSAGAPIVHVAWSPTTHMADLAVIDALGRISILFFPLQINRPYP
MRKWDSDPVDDLHSVVGCHWLPIGNAASQSRGFLTQCSGAHWAGSEYKYNHMAQPAFGPS
HPHPGRSALVCVTTNGLLRLFYQISSRHEETALELESVTAADDLITHASFCCDKPLATAS
KQLRVVRVGVNWGNPPSDKQVHPGSIQLRPSMKEVHVATTSWLQHGPSESTLDFSMAQLS
HLLVLPSFMETSNPPTFAPAVVVTVRSYLPNETSPYDQETQSIIDRWEVLNDQAQAPHPA
FEQLGPRNGAGAAPPTMTRLRKLEPVTIPKVVISMQTTTIQLGRVVCFTFSDGTVQYRDR
FTMAELYNEHNTENINSPHQVGFQFDDPTPCLQVAFSPSNFAFVQVCEDNTLKLRKLHYT
MGDLGSLQDVQARAVLASLTMPISFAWQQQMTFDDILAVVRPLTQHPKFTNALFKEIITL
LRTVVDYSEEQQQLVDTLIRNNQLQSCLSLLNHFGFNGNFEARSFHGKFASVALNLRNII
VLIVLANHSPQKSNGVLNPLDESEVVETLVGCAEWAVSLFSWLIDSLFNLLDDPEFMALL
SDQRRFQELANYLHTRNDVSVYLLLCSSTRSLLQVACRRVAGLEEISSRALTYYKTHSVT
ETGAALHHAYQRMYRTSSSSPVKPQDFERLLSTLGRDISTAYQRTLTAMAKSKDQTQPGA
TEQQQQQAQQRVELFVKSAQNRWELEMLSGANPPNIFREVLARLFTSTLTTFKALTDPAK
LYFANYDLLEVNDDAKTLRARKKAGKYVDVFKRVELVAGQQQQNTQSFPPAAVTNGAQGK
GGGGENVKTEAGVWGAAGVKLGGTPSLTLGLAGGGGGGSAGAGNGANGGAAVAMTQVHSP
RDEGAGGAGGGHAIRWRRCVRCASVMEDIMNQRPGFTYVLAQQRKCCCGGAWALVANGAL
G
Download sequence
Identical sequences B2AYT3
XP_001908884.1.27508 Pa_1_12150|chrm1_SC2|Putative

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