SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pa_1_9950|chrm1_SC2|Putative from Podospora anserina

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Pa_1_9950|chrm1_SC2|Putative
Domain Number 1 Region: 184-230,300-502
Classification Level Classification E-value
Superfamily VPS9 domain 4.32e-42
Family VPS9 domain 0.0022
Further Details:      
 
Domain Number 2 Region: 501-527,626-700,742-879
Classification Level Classification E-value
Superfamily Ankyrin repeat 1.03e-21
Family Ankyrin repeat 0.0049
Further Details:      
 
Domain Number 3 Region: 912-1006
Classification Level Classification E-value
Superfamily PX domain 0.00000000733
Family PX domain 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Pa_1_9950|chrm1_SC2|Putative
Sequence length 1308
Comment protein of unknown function
Sequence
MQPLNPFLSAFLKSPVLAQCLPPQQHILLVPLADVLLNSRDAETGAPLTASIGSEEFLGS
HVVRIPLLKGGKDGQGQGQQQNLREMRGKPKMYGTVNGRSLVVKDGGVYTNKGFKALAQA
NLLHETLWYPDTLDPRQFLIYFINRPLVGSWEEVRIVPAVPPPPSPSLAEGGLRKVLLGE
GGTGTTRKKDIKSFHELLVNFPSIAKQMQGGLEKLFREFTIVFERILPPPPPPSGKTVPE
GEPGKGVGVAGGEGTNGNGAPENVLTEDDEEVMRTSLETAVTTAIDLFQNVDKQQLSLLG
ATTDLTGPVVERLIERYIAENVHHLLFPRIAGLRRQDDLELEAKIRQMNNIDISQLGIAI
DGGMKAKREVVSRLGNAVEEFRKMPNASCPQEMMEILLATTKAATQFSEGTATQGQPRSA
TEKPAMTINADTLVSLLLYVVIKAQIKHLQARLAYIRHFVFIDDVESGEMGYALSTFEAV
LSYLDRESGGLRRASRRNKALWDAVSKGDMPELRKILEPTEDAIEDEDDYGSSRWRRRSS
TGWSFTNGASSTTLAASERFSVGSGLGHVFPFQNGSAETLEQPPPKRIKKVSMDTRSMSS
GSEISFRSLPMSIGTFTSGIEGDTSIERLVQTQDAKGESVLMMAIQHGQPQVLKYLLSFR
QYYTAPVILEDQDNEETTLFSAAVQLGNAEVINGLLDYILDSTGDDNKIREYLARQDTWG
RSAAHYLFHAPFLIGRIGRLLPWRQKDKNGQTPLFALCRSYDNPNYYTMVEEGLEIATKC
QGDGQPLHIDDHVDQKGNTLLHIVNEPKLALKILQHCDLDVNATNEKRFTALMLASKYGR
FDMVRTLFGDPRVDTAARELRGLTAVELAKDDDLRNKIDDLVLFSLSHGSSDSRTTGVVR
SFFVEDGTIRFVLKSGAPVDEHSYAVTTCRRSLADFEHLAKLLQMENPASWIPSLADLRS
PTQIPSRPSRAVLKDLQIRMDWFLKVLLAHPTFSTHEMLWEFFLVPDLQLDQMAERSKLK
ADALLEKVHEELEPVQDLREVEQFVDHARDIVRSVHFSTRSVARRANNTGNVVNDLYESS
TLLSKALATLPFLPQNYISGFETYVRSLAPSQSSPISQFFSAFLALYSNIEAILKALGRP
PQTIAKIIAIRKEVERNYNTLNRSSRWPLGLLDETRQRMNEDKEEKARKMEQEAEMLGRE
LRYMQQTVAGELAGWREMHERLGRRAIRDLARGMVVQERGRLEGVRRALRRVKAGGEGVV
RPRMRVGLVDGLLDEGDGSGSGGERWRGESLPSEWLLCYFVFLVMGLG
Download sequence
Identical sequences B2AY57
XP_001908658.1.27508 Pa_1_9950|chrm1_SC2|Putative

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]