SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pa_3_1500|chrm3_SC1|Putative from Podospora anserina

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Pa_3_1500|chrm3_SC1|Putative
Domain Number 1 Region: 294-508,611-647
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.11e-19
Family WD40-repeat 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Pa_3_1500|chrm3_SC1|Putative
Sequence length 655
Comment protein of unknown function
Sequence
MIQSRKGFHDIPHYPLETRIVTRVYAGPLRRYARYSALRDSMYGPEIPRIRVIWALETKW
SAFPVLPPKAGASEVRGIMPSPWVPQGFEKNQTLAASKWYEGYHLHCPVEELQVCHHVAA
HQGESLVPNANGELVALLGPWDRQREFILPRRGSLEIAENGSPFTEDDIVTDGEEARSRG
WMIDVGGIPLAIAWAPFFLRNNRQVLAVATIPFSDQDSSLVVEENSGNHNATSEIQGSVQ
FWEFAAEEDSSKEGMATPAKRPSRLLGAKCFSWGRPKRMQFCPVPMDESASPSTNGILAV
LCSDGRVRVIDCKAIHEDQAPMVTFGQDNDYNVEVTCLTWANTNRLALGHSDGSITLWSV
YPKTLLQRHGAHTTYVIDICSAYPSNPYLVASVPVGGCATLTDMSHPSSEFTYFPVPAIS
FQPNLLCWNESMQGFMALYPSSTPNTTIAFLHHRFFAQARSICTGPNTLTCVSVGTTHPF
ILVGCADGSVFACNALQKLFKQKGEPLRKLKIFEHEYRPVVATRSSQGNSIRGAVRILQG
YLPEVNDDPRTEKRKEMDRKKRLEREKKSKYTASGKKKGRPKKNAGLEPEQPEEEHDLEG
ELQEKLASRVVIHEPLTRVTAVAWNPNTNFSCWAASAMASGIIKVMDLGVEDFRA
Download sequence
Identical sequences B2ACN0
Pa_3_1500|chrm3_SC1|Putative XP_001903420.1.27508

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]