SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pa_4_2630|chrm4_SC2|Putative from Podospora anserina

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Pa_4_2630|chrm4_SC2|Putative
Domain Number 1 Region: 13-271
Classification Level Classification E-value
Superfamily WD40 repeat-like 4.39e-48
Family WD40-repeat 0.000000864
Further Details:      
 
Domain Number 2 Region: 188-481
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.08e-41
Family WD40-repeat 0.00036
Further Details:      
 
Domain Number 3 Region: 424-609
Classification Level Classification E-value
Superfamily WD40 repeat-like 5.13e-28
Family WD40-repeat 0.00049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Pa_4_2630|chrm4_SC2|Putative
Sequence length 610
Comment protein of unknown function
Sequence
MSIELDKIFAASPATTRGQPTQLSADPKGEQIAFASGKSIFLRSLTNPSSSKQYTSHTTT
TTVAKFSPSGFYVASGDISGKIRVWDSVEAVNTKGEYPIISGRITDIAWDGDSQRVIAVG
DGRERFGHCITADSGNSVGEVSGHSKVINAVAIRQQRPLRAATVSDDGSMCFLHGAPFKF
NSKATGLHKGFVQGTEFSPDGSWLVTVGSDKRIQIYDGKTGEPLKVVGEGVHTGSILGVS
WNKDSKRFVTASADKTVRVWDVQSGENVATWKIGEEGSSNPQDQQVGVVWTRGPQELIVT
LSLSGDLNYFTVGSSTPQAVIEGHNKSVTALSVTSNSNGTKVTTGSFDGKVVAWDIGTGV
GKAPEGEAHSNQVVQFASAGGRVYSVGWDDTLRIIDEATNLFLASPVKLSSQPKGISASS
DGTIAVALNSSIAIYDSDGKLLGETPVSYTPTTIAISGSYVAVGADNNTVQVYNLGSGGN
LSPTEKLTNSTAAISTLSFSPEGKHLAAGNSSGKIVVYTTGSWEVATDRWSSHTARVLSI
AWNKAGTHAVSGGLDTNVFVWSLAKPGSRVKAANAHKDGVYGVAFVEGDEKVVSSGGDAA
VKVWNVKNLQ
Download sequence
Identical sequences B2AE27
XP_001903916.1.27508 Pa_4_2630|chrm4_SC2|Putative

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]