SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|288960332|ref|YP_003450672.1|NC_013855 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|288960332|ref|YP_003450672.1|NC_013855
Domain Number 1 Region: 433-1001
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 4.45e-158
Family Acetyl-CoA synthetase-like 0.0000000619
Further Details:      
 
Domain Number 2 Region: 192-459
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 9.45e-54
Family NRPS condensation domain (amide synthase) 0.02
Further Details:      
 
Domain Number 3 Region: 7-206
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 3.78e-44
Family NRPS condensation domain (amide synthase) 0.019
Further Details:      
 
Domain Number 4 Region: 1017-1303
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 3.59e-38
Family Thioesterase domain of polypeptide, polyketide and fatty acid synthases 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|288960332|ref|YP_003450672.1|NC_013855
Sequence length 1318
Comment amino acid adenylation domain protein [Azospirillum sp. B510 plasmid pAB510a]
Sequence
MSSMARNIEAAYPLTPLQEGLLFHTLSHPGEPTYFEQIRATIRGALDLHAFEAAWNQVIA
RHAILRSAFAWKGTQVPVQVVGARVTIGIDHDDWRDREDVGPAWDALLAEDRARGFDMAR
APLMRLVLRRVAEDAHLFVWSHHHILLDGWSFGLVLHEVLSLYDGLARTGRPPALDPAPR
FADFLGFLDRRDRAADDRFWREHLAGFTVPTRLAVDKGQGVHEGGSGTERIRDLLLDEET
STAIREACGRMGLSLSALVHGAWARLLSAYSGENEVAFGTTTAGRPPELPGVENMVGLFI
NAIPLRVRIDPQARVGSWLAGIQKDLLRCQEHQYCGLAHIQDLSEVERGKPLFETLLSFQ
NYPLDAAHAQSWGGIRLTDYGWTGPTNYPVAVRAFPGDRIMLVLTHYRHRLDDAVADAML
EQLGALVARLAGSPDRRLGDVGVLSEAQRWTMLNGWNDTARPHDIERTLHGLAEEQARRR
PDATALVAGDGRMTYAELEAAANRLAHALVARGVAAGDLVGLCTEKSTATVVAMLAVMKA
GAAYVPLDPNYPGERIRMMIEDARLALVLTWGKGSGAVSGVDARILDLAASGAEIDACPA
TPVGRTVAPDALAYVIYTSGSSGKPKGVMLDHRGRVNNVEDYCRMFDIGPDDRTLCVSSL
SFDISVCDLFWTLHSGGSLVFPDPGREKDPGHWLDLIAREGITLWHSAPTLMDAMLDLAE
EDPRPRDSLRLAVLDGDWIPLTQPDRVRRAFPGATVVSAGGATELSIDSVTYPIGEVRKD
WLSIPYGRPMGNQCAYIVDENLQPAPVGVPGELLLGGVGMAMGYLGRPALTAEKFIPNPW
VRAGHGGERLYRTGDLARYWPDGTIELLGRIDFQVKVRGVRIELGEIEATLRGHPAVAGC
IVSAPKDLAGVRRLAAYLVAAEGAAKPDLPRLRGWLRQRVPEHLVPEAVVWLDRLPVSAN
GKVSRRDLPTPDFALGTDGFVAPATELERRLAAHWGKVLGLPPERVGAQTSFFDMGGNSL
KALRACQFPDRPIPIAALYQYRTVRALAEHIEGGRTDGGILAELAAGPGEADAPVAICVP
YGGGHAGVYQGLAEALDARMQVVSVRLPGHDHDASSEPLQSVREIGARVAEAAAEFGDRP
ILVYGHCGGVALATEIARRLENAGADLRGLVVAAAYPHHALQQPAGELFAGISDRDLAGE
FAALGGFEDIGPDEAREIGRLLRHDGNEARRYFHNCVADALPRLSTPLTCLIGRDDPLTR
SYESDWIAWRTFAERCAIRLMPGDHYFVRTHPQQVANELCAVLASTGDKHATSEKVTA
Download sequence
Identical sequences D3P0E9
gi|288960332|ref|YP_003450672.1| gi|288960332|ref|YP_003450672.1|NC_013855 WP_012976021.1.27297

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]