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Domain assignment for gi|86361187|ref|YP_473074.1|NC_007766 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|86361187|ref|YP_473074.1|NC_007766
Domain Number 1 Region: 432-994
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 6.28e-141
Family Acetyl-CoA synthetase-like 0.000000262
Further Details:      
 
Domain Number 2 Region: 1047-1313
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 2.2e-28
Family Thioesterase domain of polypeptide, polyketide and fatty acid synthases 0.024
Further Details:      
 
Domain Number 3 Region: 202-443
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 1.67e-24
Family NRPS condensation domain (amide synthase) 0.049
Further Details:      
 
Domain Number 4 Region: 26-212
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 1.22e-19
Family NRPS condensation domain (amide synthase) 0.019
Further Details:      
 
Domain Number 5 Region: 974-1047
Classification Level Classification E-value
Superfamily ACP-like 0.00000000000000366
Family Peptidyl carrier domain 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|86361187|ref|YP_473074.1|NC_007766
Sequence length 1330
Comment vicibactin biosynthesis non-ribosomal peptide synthase [Rhizobium etli CFN 42 plasmid p42f]
Sequence
MNKQITNFADARPTDAVDAVFESFPLTIAQKRIWSLEQIGNYTVFPAQVIGLRLSAAIDV
ETIAGACRALVAQNPSLAFRFRRLAGGRIEQYRGASSEVPLDILGKDGAALSEPDALAAR
KAFRDKRFDLLEGPGARIQIIRLADGQSLLTIMLHPIICDDREKSVLAGSLASILDGEPA
GDMQPVEIAAGAREADWLETDEARQALAYWRDAIGLDYAASTFPTRFNSGGLAGVARAEH
RFSIAPELWSKLERHARGKGVHVERVLHAAFCALLARYNGNYALLTGLLVARPRTEHLAS
RGRAEQVLPLVLSLTSRHSLDDVVAAISSVTQEGLARLVPLERITQELVVDEAAAQEAVV
KALFEFREPYPVPRQATNLEPSGARADSELSLVVEARTDGGAYGLIDYAGDLYDDALIAR
VSRHYCLVLEQIVAKPDLRIRDIELMGSDELDWLSAPYEDDAVNDDRPVHELISAHSRRT
PDKTAIVYGDEEWSHGWLEASTNRLGHRLRQLGVRAEVTVAIFIKRSPEAIVGILATLKA
GGAYIPVEPDHPPVRNHHILRDGGVKIVLTHSWLRHRLPEELDATVLELDKLDLEGEPDT
PLYVPTHKDQLAYVMYTSGSTGLPKGVAVEHGPLTHHLQNTSRVYGMSSESRELPFLPFS
SDGGHERWMNPLMEGGSIILPDQPLWTPEETLTAMRKHGANNASIPTTYLQQLAEWADST
DSAPPMRLYSFGGEGLAQTTFDLLSRALKSEWLINGYGPTETIMTPMVWKVRAGTKFQGV
YAPLGRAVGLRRVYVLDPDLNLCPIGVTGELYIGGEGIARGYLGKADATADRFIPDPFSK
KGGRLYRSGDLTRWREDGTVEFVGRVDHQVKLRGYRIELGEVEAALLQQPGVGEALVVLR
DDDAGGEKALVAYVVPKKDERLDVETVRAGLERSLPSYMVPAAVVELEKMPTNPNSKLDR
FALPAPQPVKRAIIEPATALEEEVLDVWRRVLKLEAISVEDNFFAIGGNSLGAIRILTQL
RQRRPKIPLTVADIFNNPTIRAFAGVMEQGEERDLSEVIVLRASGAKPRLYCFPGLLVST
REYVKLVDYLGADQPATGFICHSLSEKKEVGAPVEEIIESYVDYIRKHSGGAPCTFLGWS
WGGLLAYEAARTLANEVDVRMMAMVDVCDLGSEFAIGAKPRFRPGERDMLHRDVQAWLQK
TAMRPESDRLLSTMDADTYEQFLRFVGDEKDPLPTDGPDISSREHTFWVLIDNALIFRKH
RLVPHDVPIYPWAADDSLNRGLNLIDWRRLSPRARAAEIITGTNHLHMIGSPAFHSRLAL
RLKETEKDNA
Download sequence
Identical sequences Q2JYI9
347834.RHE_PF00457 gi|86361187|ref|YP_473074.1| gi|86361187|ref|YP_473074.1|NC_007766 WP_011428762.1.62937

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