SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A023RB17 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A023RB17
Domain Number 1 Region: 1733-2193
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.27e-145
Family RNA-dependent RNA-polymerase 0.00000000000628
Further Details:      
 
Domain Number 2 Region: 2-326
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 1.52e-140
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0000000154
Further Details:      
 
Domain Number 3 Region: 357-560,621-836
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 5.43e-133
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.00000173
Further Details:      
 
Domain Number 4 Region: 866-1004
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.12e-57
Family Viral cysteine protease of trypsin fold 0.00019
Further Details:      
 
Domain Number 5 Region: 1543-1732
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.6e-52
Family Viral cysteine protease of trypsin fold 0.00000248
Further Details:      
 
Domain Number 6 Region: 1440-1497
Classification Level Classification E-value
Superfamily Soluble domain of poliovirus core protein 3a 1.44e-19
Family Soluble domain of poliovirus core protein 3a 0.00065
Further Details:      
 
Domain Number 7 Region: 1196-1371
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000483
Family Nucleotide and nucleoside kinases 0.062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A023RB17
Sequence length 2193
Comment (tr|A0A023RB17|A0A023RB17_9ENTO) Protein 3D {ECO:0000256|RuleBase:RU364118} KW=Complete proteome OX=39054 OS=Enterovirus A71. GN=CN12_49168gpPOL OC=Picornavirales; Picornaviridae; Enterovirus; Enterovirus A.
Sequence
MGSQVSTQRSGSHENSNSATEGSTINYTTINYYKDSYAATAGKQSLKQDPDKFANPVKDI
FTEMAAPLKSPSAEACGYSDRVAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVD
KPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQ
CNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIP
ISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDFDQGATPV
IPITITLAPMCSEFAGLRQAVTQGFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIP
GEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQ
STLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIW
DFGLQSSVTLVIPWISNTHYRAHARDGVFDYYTTGLVSIWYQTNYVVPIGAPNTAYIIAL
AAAQKNFTMKLCKDASDILQTGTIQGDRVADVIESSIGDSVSRALTQALPAPTGQNTQVS
SHRLDTGKVPALQAAEIGASSNASDESMIETRCVLNSHSTAETTLDSFFSRAGLVGEIDL
PLEGTTNPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMF
VPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHK
QEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVIRIYMRMKHVRAWVPRPMRNQNYLFKA
NPNYAGNSIKPTGASRTAITTLGKFGQQSGAIYVGNFRVVNRHLASHNDWANLVWEDSSR
DLLVSSTTAQGCDTIARCNCQTGVYYCNSKRKHYPVSFSKPSLIFVEASEYYPARYQSHL
MLAVGHSEPGDCGGILRCQHGVIGIVSTGGNGLVGFADVRDLLWLDDEAMEQGVSDYIRG
LGDAFGMGFTDAVSREVEALKNHLIGSEGAVEKILKNLVKLISALVIVIRSDYDMVTLTA
TLALIGCHGSPWAWIKSKTASILGIPMAQKQSASWLKKFNDAASAAKGLEWISNKISKFI
DWLKEKIIPAAREKVEFLNNLKQLPLLENQISNLEQSAASQEDLEAMFGNVSYLAHFCRK
FQPLYATEAKRVYALEKRINNYMQFKSKHRIEPVCLIIRGSPGTGKSLATGIIARAIADK
YHSSVYSLPPDPDHFDGYKQQIVTVMDDLCQNPDGKDMSLFCQMVSTVDFIPPMASLEEK
GVSFTSKFVIASTNASNIIVPTVSDSDAIRRRFFMDCDIEVTDSYKTDLGRLDAGRAARL
CSENNTANFKRCSPLVCGKAIQLRDRKSKVRYSVDTVVSELIREYNNRSTIGNTIEALFQ
GPPKFRPIRISLEEKPAPDAISDLLASVDSEEVRQYCRDQGWIVPDTPTNVERHLGRAVL
IVQSIATVVAVVSLVYVIYKLFAGFQGAYSGAPKQTLKKPVLRTATVQGPSLDFALSLLR
RNIRQVQTDQGHFTMLGVRDHLAVLPRHSQPGKTIWIEHKLVRIVDAVELVDEQGVNLEL
TLVTLDTNEKFRDITKFIPETISPASDATLVINTEHMPSMFVPIGDVVQYGFLNLSGKPT
HRTMMYNFPTKAGQCGGVVTAVGKVIGIHIGGNGRQGFCAALKRGYFCSEQGEIQWVKPN
KETGRLNINGPTRTKLEPSVFHDVFEGTKEPAVLSSKDPRLEVDFEQALFSKYVGNTLYE
PDEFVREAALHYANQLKQLDIKTTKMSMEDACYGTENLEAIDLHTSAGYPYSALGIKKRD
ILDPVTRDVSKMKFYMDKYGLDLPYSTYVKDELRALDKIKKGKSRLIEASSLNDSVYLRM
AFGHLYETFHANPGTVTGSAVGCNPDVFWSKLPILLPGSLFAFDYSGYDASLSPVWFRAL
EIVLREIGYSEDAVSLIEGINHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRTL
LIKTFKGIDLDELNMVAYGDDVLASYPFPIDCSELAKTGKEYGLTMTPADKSPCFNEVTW
ENATFLKRGFLPDHQFPFLIHPTMPMREIHESIRWTKDARNTQDHVRSLCLLAWHNGKEE
YEKFVSTIRSVPVGKALAIPNFENLRRNWLELF
Download sequence
Identical sequences A0A023RB17

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]