SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A059WGC9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A059WGC9
Domain Number 1 Region: 2-333
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.22e-153
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.00000000000906
Further Details:      
 
Domain Number 2 Region: 363-563,608-825
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 6.38e-152
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.00000000019
Further Details:      
 
Domain Number 3 Region: 1732-2184
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.52e-150
Family RNA-dependent RNA-polymerase 0.00000000000192
Further Details:      
 
Domain Number 4 Region: 855-993
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 7.81e-61
Family Viral cysteine protease of trypsin fold 0.0000809
Further Details:      
 
Domain Number 5 Region: 1534-1724
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.49e-55
Family Viral cysteine protease of trypsin fold 0.00000167
Further Details:      
 
Domain Number 6 Region: 1429-1490
Classification Level Classification E-value
Superfamily Soluble domain of poliovirus core protein 3a 2.62e-18
Family Soluble domain of poliovirus core protein 3a 0.00043
Further Details:      
 
Domain Number 7 Region: 1208-1361
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000167
Family Nucleotide and nucleoside kinases 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A059WGC9
Sequence length 2185
Comment (tr|A0A059WGC9|A0A059WGC9_9ENTO) Protein 3D {ECO:0000256|RuleBase:RU364118} OX=12075 OS=Swine vesicular disease virus. GN= OC=Picornavirales; Picornaviridae; Enterovirus; Enterovirus B.
Sequence
MGAQVSTQKTGAHETSLSAAGNSVIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDI
MVKSMPALNSPSAEECGYSDRVRSITLGNSTITTQECANVVVGYGVWPTYLKDEEATAED
QPTQPDVATCRFYTLESVMWQQSSPGWWWKFPDALSNMGLFGQNMQYHYLGRAGYTIHVQ
CNASKFHQGCLLVVCVPEAEMGCATLANKPDPKSLSKGEIANMFESQNSTGETAVQANVI
NAGMGVGVGNLTIFPHQWINLRTNNSATIVMPYINSVPMDNMFRHNNFTLMVIPFAPLSY
STGATTYVPITVTVAPMCAEYNGLRLAGKQGLPTLSTPGSNQFLTSDDFQSPSAMPQFDV
TPEMDIPGQVNNLMEIAEVDSVVPVNNTEGKVMSIEAYQIPVQSNPTNGSQVFGFPLTPG
ANSVLNRTLLGEILNYYAHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGAPTTRKEAML
GTHVIWDVGLQSSCVLCIPWISQTHYRYVVMDEYTAGGYITCWYQTNIVVPADAQSDCKI
LCFVSACNDFSVRMLKDTPFIKQDNFFQGPPGEVMERAIARVADTIGSGPVNSESIPALT
AAETGHTSQVVPSDTMQTRHVKNYHSRSESTVENFLCRSACVFYTTYKNHDSDGDNFAYW
VINTRQVAQLRRKLEMFTYARFDLELTFVITSTQEQSTTQGQDTPVLTHQIMYVPPGGPV
PTKVNSYSWQTSTNPSVFWTEGSAPPRMSIPFIGIGNAYSMFYDGWARFDKQGTYGISTL
NNMGTLYMRHVNDGGPGPIVSTIRIYFKPKHVKTWVPRPPRLCQYQKAGNVNFEPTGVTE
GRTDITTMKTTGAFGQQSGAVYVGNYRVVNRHLATRADWQNCVWEDYNRDLLVSTTTAHG
CDTIARCDCTAGVYFCASRNKHYPVTFEGPGLVEVQESEYYPKKYQSHVLLAAGFAEPGD
CGGILRCQHGVIGIVTVGGEGVVGFADVRDLLWLEDDAMEQGVRDYVEQLGNAFGSGFTN
QICEQVALLKESLIGQDSILEKSLKALVKIVSALVIVVRNHDDLITVTATLALIGCTASP
WRWLKQKVSQYYGIPMAERQNSGWLKKFTEMTNACKGMEWIAIKIQKFIEWLKVKILPEV
KEKHEFLNRLKQLPLLESQIATIEQSAPSQSDQEQLFSNVQYFAHYCRKYAPLYAAEAKR
VFSLEKKMSNYIQFKSKCRIEPVCLLLHGSPGAGKSVATNLIGRSLAEKLNSSVYSLPPD
PDHFDGYKQQAVVIMDDLCQNPDGKDVSLFCQMVSSVDFVPPMAALEEKGILFTSPFVLA
STNAGSVNAPTVSDSRALVRRFHFDMNIEVVSMYSQNGKINMPMAVKTCDEECCPVNFKK
CCPLVCGKAIQFVDRRTQVRYSLDMLVTEMFREYNHRHSVGATLEALFQGPPVYREIKIS
VAPETPPPPAVADLLKSVDSEAVREYCKEKGWLIPEVDSTLQIEKHVNRAFICLQALTTF
VSVAGIIYIIYKLFAGFQGAYTGMPNQKPKVPTLRQAKVQGPAFEFAVAMMKRNASTVKT
EYGEFTMLGIYDRWAVLPRHAKPGPTILMNDQVVGVLDAKELVDKDGTNLELTLLKLNRN
EKFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGRVTDYGFLNLGGTPTKRMLMYNF
PTRAGQCGGVLMSTGKVLGIHVGGNGHQGFSAALLRHYFNEEQGEIEFIESSKDAGFPVI
NTPSKTKLEPSVFHHVFEGNKEPAVLRNGDPRLKANFEEAIFSKYIGNVNTHVDEYMMEA
VDHYAGQLATLDISTEPMKLEDAVYGTEGLEALDLTTSAGYPYVALGIKKRDILSKRTRD
LTKLKECMDKYGLNLPMVTYVKDELRSADKVAKGKSRLIEASSLNDSVAMRQTFGNLYKT
FHLNPGIVTGSAVGCDPDVFWSKIPVMLDGHLIAFDYSGYDASLSPVWFTCLKLLLEKLG
YTNKETNYIDYLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKGI
DLDQFRMIAYGDDVIASYPWPIDASLLAEAGKDYGLIMTPADKGECFNEVTWTNVTFLKR
YFRADEQYPFLVHPVMPMKDIHESIRWTKDPKNTQDHVRSLCLLAWHNGEHEYEEFIRKI
RSVPVGRCLSLPAFSTLRRKWLDSF
Download sequence
Identical sequences A0A059WGC9

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]