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Domain assignment for A0A093NH88 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A093NH88
Domain Number 1 Region: 83-396
Classification Level Classification E-value
Superfamily WD40 repeat-like 3.66e-102
Family WD40-repeat 0.00000000000886
Further Details:      
 
Domain Number 2 Region: 1-65
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 3.14e-21
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000228
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A093NH88
Sequence length 399
Comment (tr|A0A093NH88|A0A093NH88_PYGAD) Lissencephaly-1 {ECO:0000313|EMBL:KFW63521.1} KW=Complete proteome; Reference proteome OX=9238 OS=Pygoscelis adeliae (Adelie penguin). GN=AS28_09427 OC=Pygoscelis.
Sequence
NRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIRLQKKVMELESK
LNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDAT
IKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGH
DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS
CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFL
LSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKR
CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
Download sequence
Identical sequences A0A087R072 A0A087V3J9 A0A091GV46 A0A091KP13 A0A091LHD8 A0A091MAL9 A0A091PX44 A0A093EYJ6 A0A093FVN6 A0A093GYW7 A0A093J6E7 A0A093NH88 R0JS25
XP_010130756.1.100080

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