SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0L0C579 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0L0C579
Domain Number 1 Region: 98-412
Classification Level Classification E-value
Superfamily WD40 repeat-like 4.58e-97
Family WD40-repeat 0.000000000354
Further Details:      
 
Domain Number 2 Region: 8-80
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 3.92e-23
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000534
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0L0C579
Sequence length 415
Comment (tr|A0A0L0C579|A0A0L0C579_LUCCU) Uncharacterized protein {ECO:0000313|EMBL:KNC27558.1} KW=Complete proteome; Reference proteome OX=7375 OS=Lucilia cuprina (Green bottle fly) (Australian sheep blowfly). GN=FF38_10597 OC=Oestroidea; Calliphoridae; Luciliinae; Lucilia.
Sequence
VENSMKMVLSQRQREELNQAIADYLGSNGYSESLEAFRKEADLSGETEKKFGGLLEKKWT
SVIRLQKKVMELEAKLSEAEKEVIEGAPSKAKRSPGEWIPRPPEKFSLTGHRASITRVIF
HPIFSLMVSASEDAVIKIWDFETGEYERSLKGHTNSVQDIAFDAQGKLLASCSADLSIKL
WDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDKTIKMWEVATGYCVKTYTGHRE
WVRMVRVHMDGSIFASCSIDHSVRVWSTNSKDCKVELRDHDHTVECIAWAPEASSSAINE
AAGADNKKGHHQGPFLASGSRDKTIRVWDVSVGLCLFVLSGHDNWVRELAFHPGGKYLIS
ASDDKTIRVWDLRNKRCMKTLYAHQHFCTSVDFHKTHPYVISGSVDTTVKVWECR
Download sequence
Identical sequences A0A0L0C579
KNC27558

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]