SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0P1KLZ1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0P1KLZ1
Domain Number 1 Region: 129-454
Classification Level Classification E-value
Superfamily WD40 repeat-like 4.58e-50
Family WD40-repeat 0.0000299
Further Details:      
 
Domain Number 2 Region: 4-92
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.000000000111
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0P1KLZ1
Sequence length 457
Comment (tr|A0A0P1KLZ1|A0A0P1KLZ1_9SACH) nudF homolog {ECO:0000256|HAMAP-Rule:MF_03141} OX=1654605 OS=Lachancea quebecensis. GN=LAQU0_S01e04764g OC=Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea.
Sequence
MSLLPPEQRHLLHRCILNYVRSQIPGDRAEGEALEQTEEHHVIKSLAKWLRVDPDAPDGE
KAADGSLLPRKWNSIVRLQRRIIELEREIQELLDENENLRESGPASPANGALKSWLPRER
PSFGVSVGASVTSVKLHPELPLVFVATDAGKLQCYDLMNYTIPVASVQAHMRGITAIDAY
VGEDSQCLVATASKDLHCKVFRLVDSELQLIRTLSGHEHIVSQIKIWNNSTNTLVASCSR
DLTCKIWDVANGWCLKSFQPHAEWVRCLDVMGEYVVTGSNDSTVRLSHWPTGRALSFGTG
HEFPVEKVRIIPMLPAESVEHSHKFNAHNEDYIPLGFSHVISTSRDGTLRIWQVPLPRFV
AHRPPQPNPARSHFNLVATLKAHSSWVRDVRVRGNHVFSCSDDRSIKIWDLSTCEVVRSI
NSLHLGFINCIDIDCGGLNRQLLVSGGADGKLEVFMK
Download sequence
Identical sequences A0A0P1KLZ1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]