SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A168F6A7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A168F6A7
Domain Number 1 Region: 102-416,456-471
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.34e-79
Family WD40-repeat 0.000000128
Further Details:      
 
Domain Number 2 Region: 4-81
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 4.84e-24
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A168F6A7
Sequence length 473
Comment (tr|A0A168F6A7|A0A168F6A7_9HYPO) nudF homolog {ECO:0000256|HAMAP-Rule:MF_03141} KW=Complete proteome; Reference proteome OX=1081109 OS=Aschersonia aleyrodis RCEF 2490. GN=AAL_02096 OC=Moelleriella.
Sequence
MSRMLPTRQAEELHKSIIAYLSANNLSKSAAALREEAGLGEDVYDATTEKKYETLLEKKW
TSIVRLQKKIMDLESRNASLQSEVDNATPGSLSKRNQDPASWLPRKPSKHTLESHRDTIN
CIAFHPTFSSIASGSDDCTVKIWDWELGELEQTIKGHTRAVKGLDYGGPRGATLLASCSS
DLTIKLWDPSDQYKNIRTLSGHDHSVSAIRFISSGAGGSQSSASANLLISASADKSLRIW
DTTTGYCLKALRGHTDWVRDVCPSLDGQYILSAGSDHTARLWDISIPNPENKLTLIGHEN
AVGCCTFAPPTAYVHLATMAGLRKPPPASSSAEFLATGSRDKTIRLWDGRGTCFKTLVGH
DNWVSSLVFHPGGKYLLSCADDKTVRCWDLAQEGKCVKVLDEAHGHFVTCLRWAPSIQKD
GRATNGNGTQQEQGQESGGSLKRSIGPPETIETRIRCVIASGSVDKTLRIWAS
Download sequence
Identical sequences A0A168F6A7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]