SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1D2VGI7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1D2VGI7
Domain Number 1 Region: 74-179,219-344,373-477,504-520
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.07e-54
Family WD40-repeat 0.00000501
Further Details:      
 
Domain Number 2 Region: 1-77
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00000000000000235
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A1D2VGI7
Sequence length 521
Comment (tr|A0A1D2VGI7|A0A1D2VGI7_9ASCO) Dynein regulator {ECO:0000313|EMBL:ODV60745.1} KW=Complete proteome; Reference proteome OX=1344418 OS=Ascoidea rubescens DSM 1968. GN=ASCRUDRAFT_46974 OC=Saccharomycetes; Saccharomycetales; Ascoideaceae; Ascoidea.
Sequence
LTIKQQNDLNRSIIIYLKNRDIDQELIDELIHNLSFNNTDFDLIASSEINLLEKKWSTVI
RLQKKILELENKVNQLNEILNNNNFNNNITDSFSSLTTNDNNDLSSLKKINWLPTNVKQT
LKAHKSQVNTISIHPILPQLVSGCNDGSLIVWDLLNSIQPEFINKNAHSRSINCTCFSPL
PISLTSLNNSSNSSSNSIQNNDSNGLKNSSTFSKNQIYLFATCSSDLFIKIWDPNNDYKP
IRTLSGHDHSISSISFKNSNPNHLFSCSRDFSIKLWDITNGWCLKSFIGHSNWVRSINLN
YNDNFLLSCSNDQSIRLSHSDTGTGLALLIGHHQVVEDCKFVPEISNVYLDKLAKKFVSK
EILDNQNYKTLGYKYCATCGRDDTIKIWLLPLPIIRPHRSPLPSSNPTGVLLADLKGHSS
WVRSLQFHPGGRYLFSASDDKTIKIWDISLTNYDVIKCIKTLSGGHESFINKICFASSNG
STSKESKKEAEKQKRKLIKLDKSIRCTLASGGADNTVCIWA
Download sequence
Identical sequences A0A1D2VGI7
XP_020047052.1.61322

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]