SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1L7B663 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1L7B663
Domain Number 1 Region: 1741-2201
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.58e-144
Family RNA-dependent RNA-polymerase 0.00000000000662
Further Details:      
 
Domain Number 2 Region: 2-328
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.18e-137
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.00000000946
Further Details:      
 
Domain Number 3 Region: 359-560,617-831
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 9.93e-133
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.00000205
Further Details:      
 
Domain Number 4 Region: 874-1012
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.99e-57
Family Viral cysteine protease of trypsin fold 0.00022
Further Details:      
 
Domain Number 5 Region: 1551-1740
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 3.47e-53
Family Viral cysteine protease of trypsin fold 0.00000271
Further Details:      
 
Domain Number 6 Region: 1448-1506
Classification Level Classification E-value
Superfamily Soluble domain of poliovirus core protein 3a 4.58e-20
Family Soluble domain of poliovirus core protein 3a 0.00052
Further Details:      
 
Domain Number 7 Region: 1204-1368
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000414
Family Nucleotide and nucleoside kinases 0.062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1L7B663
Sequence length 2201
Comment (tr|A0A1L7B663|A0A1L7B663_9ENTO) Protein 3D {ECO:0000256|RuleBase:RU364118} OX=86107 OS=Coxsackievirus A6. GN= OC=Picornavirales; Picornaviridae; Enterovirus; Enterovirus A.
Sequence
MGAQVSTEKSGSHETKNVATEGSTINFTNINYYKDSYAASASRQDFAQDPAKFTRPVLDT
IREVAAPLQSPSVEACGYSDRVAQLTVGNSTITTQEAANIVLSYGEWPEYCPSTDATAVD
KPTRPDVSVNRFYTLSTKSWKTESTGWYWKFPDVLNDTGVFGQNAQFHYLYRSGFCMHVQ
CNASKFHQGALLVAAIPEFVVAASSPATKPNGQGLYPDFAHTNPGKNGQEFRDPYVLDAG
VPLSQALVYPHQWINLRTNNCATIIMPYVNALPFDSALNHSNFGLVVIPISPLKYCNGAT
TEVPITLTIAPLSSEFSGLRQAIKQGFPTELKPGTNQFLTTDDGTSPPILPGFEPTPLIH
IPGEFTSLLDLCQIETILEVNNTTGTTGVNRLLIPVRAQNNVDQLCASFQVDPGRNGPWQ
STMVGQICRYYTQWSGSLKVTFMFTGSFMATGKMLIAYTPPGSAQPATREAAMLGTHIVW
DFGLQSSVTLVIPWISNTHFRAVKTGGVYDYYATGIVTIWYQTNFVVPPDTPTEANIIAL
GAAQKNFTLKLCKDTDEIQQTAEYQNDPIANAVESAVSALADTTISRVTAANTAVSTHSL
GTGRVPALQAAETGASSNASDENLIETRCVMNRNGVNEASVEHFYSRAGLVGVVEVKDSG
TSLDGYTVWPIDVMGFVQQRRKLELSTYMRFDAEFTFVSNLSDSTTPGMLLQYMYVPPGA
PKPDSRKSYQWQTATNPSVFAKLSDPPPQVSVPFMSPATAYQWFYDGYPTFGEHKQATNL
QYGQCPNNMMGHFAIRTVSESTTGKNIHVRVYMRIKHVRAWVPRPLRSQAYMVKNYPTYS
QTITNTATDRASITTTDYEGGVPANPQRTSGKFGQQSGAIYVGNFRVVNRHLATHNDWAN
LVWESSSRDLLVSSTTAQGCDTIARCDCQTGVYYCNSRRKHYPVSFSKPSLVFVEASEYY
PARYQSHLMLAKGHSEPGDCGGILRCQHGVIGIVSTGGGGLVGFADVRDLLWLDEEAMEQ
GVSDYIKGLGDAFGTGFTDAVSREVEALKSYLIGSEGAVEKILKNLIKLISALVIVIRSD
YDMVTLTATLALIGCHGSPWAWIKAKTASILGIPIAQKQSASWLKKFNDMASAAKGLEWI
SNKISKFIDWLKEKIIPAAREKVEFLNNLKQLPLLENQISNLEQSAASQEDLEAMFGNVS
YLAHFCRKFQPLYATEAKRVYALEKRMNNYMQFKSKHRIEPVCLIIRGSPGTGKSLATGI
IARAIADKYHSSVYSLPPDPDHFDGYKQQVVTVMDDLCQNPDGKDMSLFCQMVSTVDFIP
PMASLEEKGVSFTSKFVIASTNASNIIVPTVSDSDAIRRRFYMDCDIEVTDSYKTDLGRL
DAGRAAKLCSENNTANFKRCSPLVCGKAIQLRDRKSKVRYSVDTVISELIREYNNRSAIG
NTIEALFQGPPKFRPIRISLEETPAPDAISDLLASVDSEEVRQYCRDQGWIIPETPTNVE
RHLNRAVLVMQSIATVVAVVSLVYVIYKLFAGFQGAYSGAPKQALKKPVLRTATVQGPSL
DFALSLLRRNIRQVQTDQGHFTMLGVRDRLAVLPRHSQPGKTIWVEHKLVNVLDAVELVD
EQGVNLELTLITLDTNEKFRDITKFIPESISGASDATLVINTEHMPSMFVPVGDVVQYGF
LNLSGKPTHRTMMYNFPTKAGQCGGVVTSVGKVIGIHIGGNGRQGFCAGLKRSYFASEQG
EIQWVRPNKETGRLNINGPTRTKFEPSVFHDVFEGNKEPAVLHNKDPRLEVDFEQALFSK
YVGNTLHEPDEYIREAALHYANQLKQLNINTSQMSMDEACYGTENLEAIDLHTSAGYPYS
ALGIKKRDILDPTTRDVSKMKFYMDKYGLDLPYSTYVKDELRSIDKIKKGKSRLIEASSL
NDSVYLRMAFGHLYETFHANPGTVTGSAVGCNPDVFWSKLPILLPGSLFAFDYSGYDASL
SPVWFRALEMVLREIGYSEEAISLIEGINHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMI
NNIIIRALLIKTFKGVDLDELNMVAYGDDVLASYPFPIDCLELAKTGREYGLTMTPADKS
PCFNEVNWENATFLKRGFLPDEQFPFLIHPTMPMKEIHESIRWTKDARNTQDHVRSLCLL
AWHNGKQEYEKFVSTIRSVPVGKALAIPNYENLRRNWLELF
Download sequence
Identical sequences A0A1L7B663

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]