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Domain assignment for A0A1Y3EAU6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1Y3EAU6
Domain Number 1 Region: 63-360
Classification Level Classification E-value
Superfamily WD40 repeat-like 4.19e-93
Family WD40-repeat 0.00000000116
Further Details:      
 
Domain Number 2 Region: 11-45
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.000000000235
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00094
Further Details:      
 
Domain Number 3 Region: 454-536
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000027
Family Cold shock DNA-binding domain-like 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1Y3EAU6
Sequence length 1330
Comment (tr|A0A1Y3EAU6|A0A1Y3EAU6_9BILA) Lissencephaly-1 homolog {ECO:0000256|HAMAP-Rule:MF_03141} OX=6335 OS=Trichinella nativa. GN=D917_00560 OC=Trichinellida; Trichinellidae; Trichinella.
Sequence
MALLNRKPVDDGDKKFSGLLEKKWVSVIRLQKKVIDLEAKLSETEKEYILGAPTRDKRSP
TEWIPRPPEKYTLSGHRASVVRVVFHPVFSLIATCSEDATIKIWDFETGDFEKTLKGHTD
CVQDIAFDHTGKLLASCSADMSVKLWDFQTYDCIRTLNGHDHNVSSVAFLPSGDFLVSAS
RDKTIKLWELSTGYCVKTFTGHREWVRMVRVSPDGSLLASCGNDQTVRVWAVATKECKAE
LRDHDHVVECVCWANDSVIPHINEGTANGAAALQRQGPFLASGSRDKTIKVWDVSIGVCL
FTLSDHDNWIRCLRFHPRGKYLLSVSDDKTMRIWSIAGRRCQKTIEAHNHFVTSLVCRQT
YSGVALNNWELRFGERLDAFRLSLSPLACLMFHIFYTLALTAHNMPAFKYRRQYCRMVVG
SATGSKVIKRFWDDALLLGRVIKQASVGYEKLPCVRVRVRRDEYNEYLHAFYSKPTDFWA
LNKQSLAAVGDTVLIRKMESSPLPTVTHRLERIVFQHGCPIDPITKKRIIHDEYEEIVQF
RNQSILEISSMSLLESCPRSVDAKSYMQRRVESISQLLAVVDNEMLPKGEVTHGPRTFLQ
RLPRHMRRRAMSRNVKRLPRRCRFPAQRLLENAKLRKKSPNRSRRRRPSNLVREYVRRQG
KCRWLETHIWHAKRFRMVEAWQFKLALGGFQRSWRATFRDAAKHATMRDVSHMVLLRLSG
QEGGLLDGLRRLCSSRLGLTFGAASTLDGSREGSSVLYRADQYPFHCIGPVNFLWQPSLS
TGEHCCRRILWLWIHPSVKDELVAELCRVFGLVEVEKREDVTDEKFHSLTEFRMNVQLAG
AEDYCSADESGVKLTIMDRMLLRFRLTGPKSTAILDQALNMRKSFERVSQLLNSEQSNWV
KSYFSENPRLAECLAQHTEAWTREVFWRNPAELAPRIVLSYLIRNPRLEFTFRKTLPDQN
GSQNTNLDSCCSLLDDDNRQLPFSPLWDDGFRAEVLRRKASQREIDKVKQQRIVKTAQTD
MSHLESFVPVLLIQRPGSQDENDHLGCGWDLVVPSDWGMEFWLTMQYSTARAVGLDHSRT
LAAERGVFHFPEAWHDCPAGQTWNADCCERDLQAYKKRPKNRRLRYDKLKVKYPFEFPWA
ELNAIWTKTTNDGSYFVLRDREILNSLALFNQPKLDADFEKICSKALVQVKIRCLSRGIV
KRYAMICMPRAEDVKNEKEVSFDILFDECLSVAAKKRKNHLPEQVTASVETDHAAEDVNS
RNVVGFAIDGGYSLSRGCGIGIGLCSYAALQNLISTSVKIHSGLFVLYRNKTTRKYFPAI
LNIAAADFSL
Download sequence
Identical sequences A0A1Y3EAU6

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