SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A229WPB0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A229WPB0
Domain Number 1 Region: 101-411
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.41e-81
Family WD40-repeat 0.0000000483
Further Details:      
 
Domain Number 2 Region: 4-80
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 6.8e-25
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A229WPB0
Sequence length 467
Comment (tr|A0A229WPB0|A0A229WPB0_ASPFM) Lissencephaly-1 homolog {ECO:0000256|HAMAP-Rule:MF_03141} KW=Complete proteome OX=746128 OS=Neosartorya fumigata (Aspergillus fumigatus). GN=CDV57_00438 OC=Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.
Sequence
MSQLLTARQAEELHKSIIAYLASVNLTESSAALRAELGDSVSIDDATLKKYEGLLEKKWT
SVVRLQKKIMDLESRCAALQSELDSATPTSLLRKNQDPTSWLPRSPARHILEGHRNPVTC
VAFHPVFSSLASGSDDTTIKIWDWELGELERTVKGHTKAVLDVDYGGPRGGTLLASCSSD
LTIKLWDPSDNYKNIRTLPGHDHSVSSVRFIPSGAAGSPMSGNLLVSASRDKTLRIWDVT
TGYCVKTLSGHVDWVRAVAPSIDGRFLLAAGDDRIPRLWDLSSAETKSTFLGHEHVIECV
AIAPAASYPHLAVLSGLKKPPPASSSAEFFATGSRDKTIRLWDSRGNLIKTLVGHDNWVR
ALAFHPGGKHLLSVADDKTIRCWDLTQECKCVRVISDAHGHFVTCLRWAPPLIKDGGANG
EAETNGTPAATSTTNGVRPDPNVATKISIRCVIATGSVDQKVRIFAT
Download sequence
Identical sequences A0A0J5Q3V4 A0A229WPB0 B0XM00 Q4WLM7
5085.CADAFUAP00002073 Afu6g12970 XP_751175.1.65241 Afum_A1163:AFUB_001770.t1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]