SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A2K5S3Z0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A2K5S3Z0
Domain Number 1 Region: 93-406
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.22e-102
Family WD40-repeat 0.00000000000798
Further Details:      
 
Domain Number 2 Region: 12-75
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 4.84e-21
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000256
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A2K5S3Z0
Sequence length 409
Comment (tr|A0A2K5S3Z0|A0A2K5S3Z0_CEBCA) Platelet activating factor acetylhydrolase 1b regulatory subunit 1 {ECO:0000313|Ensembl:ENSCCAP00000035099} KW=Complete proteome OX=1737458 OS=Cebus capucinus imitator. GN=PAFAH1B1 OC=Platyrrhini; Cebidae; Cebinae; Cebus.
Sequence
MVANSHNRNTLEAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRL
QKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFS
VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG
FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR
PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET
KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT
LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
Download sequence
Identical sequences A0A2K5S3Z0

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]