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Domain assignment for A0DB19 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0DB19
Domain Number 1 Region: 87-400
Classification Level Classification E-value
Superfamily WD40 repeat-like 6.23e-77
Family WD40-repeat 0.00000016
Further Details:      
 
Domain Number 2 Region: 2-71
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000000000000222
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0DB19
Sequence length 403
Comment (sp|A0DB19|LIS11_PARTE) Lissencephaly-1 homolog 1 {ECO:0000255|HAMAP-Rule:MF_03141} KW=Complete proteome; Reference proteome OX=5888 OS=Paramecium tetraurelia. GN=GSPATT00015130001; OC=Oligohymenophorea; Peniculida; Parameciidae; Paramecium.
Sequence
MVLTARQRDELNQAIHQYLLISYQQSAQLFKTEAAVKDGQIEADLLEKKWNSIVRLSKRV
ITLEQQVEQLNEQLAQAQAGKIQFNKSDDEQRLTPIEKFKLEGHRAGVNCVAFHPQYQIL
GSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAFDPTGKYICSASSDLSIKIWELKNHT
CVKTLIGHEHSVSTVQFSDHGDFILSASRDKNIKLWEVATGFCKKTFSEHQEWVRCAVFS
NDEKQIASCSQDQMIYIWVIDSGQVLHQLSGHEHVVEQVKYIPEHGAKQILTQQQQQNIQ
TINLLVSVSRDKEIKIWNTILGTNLFTLSGHDNWVNGVSFHPDGVHMLSVSDDKTIRVWN
LKEQKQKKKIENAHDKFILKCEINKFIFATCSVDQTIKLWLLS
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Identical sequences A0DB19
GSPATP00015130001 XP_001447633.1.48737

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