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Domain assignment for J9INF0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  J9INF0
Domain Number 1 Region: 117-329,419-526
Classification Level Classification E-value
Superfamily WD40 repeat-like 3.57e-86
Family WD40-repeat 0.0000001
Further Details:      
 
Domain Number 2 Region: 4-83
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000000000131
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) J9INF0
Sequence length 529
Comment (tr|J9INF0|J9INF0_9SPIT) Lissencephaly-1 homolog {ECO:0000256|HAMAP-Rule:MF_03141} KW=Complete proteome; Reference proteome OX=1172189 OS=Oxytricha trifallax. GN=OXYTRI_05394 OC=Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
Sequence
MVGLTSKQREELNVAIHEYLVKNRFTNSAQIFAEETGIQDEDSIQNSKASTSLGIKDVLE
KKWTSVAKLKKQNIELERQNKQFKEQMVCERCGGGTSQIQGGASNIAGAVGDGLPRQPEK
YTLLGHRQRITKVQIHPIYQVVASSSEDGSIKLWDYEQGELETTMKSHTGCVNYISFHQS
GKFLASCATDQTIKLWDLQTHSVYKTLQGHEHEVSCVEYLPGGDQIVSCSRDNTIKIWDT
SSGYCLQTIPAHSEWIRKVAVNLKGSLLASASKDESIIVWNLEKLKDAKNNTSQQQDSII
SVLREHENQIDCIVWAPPESCLIIDNADYNKNFLASLSMQNNDAQGNGDYAGSLATPGFA
DSSQSPLEESKDNGASGGGQEKMTTKEKIQQMKLKMQARKKKDDGSLPEEEKKQQPSNHI
VLSDDVQRDYLASAARDKTIKIWEVRNCRCVVTLQGHDNWVTDLVFHPGGKYLLSSSDDK
SLRIWDLSNGRCYRKIQNAHDHFVSSIDMKAKVVVTGSVDKTLKVWTCR
Download sequence
Identical sequences J9INF0

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