SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for U3K2B0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  U3K2B0
Domain Number 1 Region: 136-450
Classification Level Classification E-value
Superfamily WD40 repeat-like 6.02e-62
Family WD40-repeat 0.00032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) U3K2B0
Sequence length 483
Comment (tr|U3K2B0|U3K2B0_FICAL) Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein {ECO:0000313|Ensembl:ENSFALP00000009164} KW=Complete proteome; Reference proteome OX=59894 OS=Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis). GN=RRP9 OC=Ficedula.
Sequence
VAIHCHCHLAGLPAAGLGPKGHGGQRTQRAPGADGRPRATAGRPADEEVSSDSETESPLL
GRRRREAAEEEVEETPQEKKLRLAKQYLEELRQLAEEERAEEEEELEPADLIGDRLKEDV
LEQKGRLQRLVAKDVRPPDPARIRVLRGHQLPVTCLVISPDDRFIFSSSKDGSLIKWEVD
SGKRLCVVPGGKKGTEERHMGHASHVLCMAISSDGKYLATGDRNKLIMIWDAATCKRLHI
FTGHRDAVSGLSFRKGTHQLYSASHDRCVKVWDVAENAYVETLFGHQDVITGLDSLSREC
CVTAGGRDGTVRLWKIPEESQLVFSGHQGSIDCIQLINEEHMVSGADDGSLALWGLTKKK
PLALAQQAHGEQDSQGLQQPYWISAVAALRNSDLLATGSHSGSVKLWKCGEGFRKLEHLL
DIPLVGFVNSLKFSAAGDFLVAGIGQEHRLGRWWRIKEAKNSICIIPLKQKTTAPNPESP
GSS
Download sequence
Identical sequences U3K2B0
ENSFALP00000009164

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]