SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for U3K5X3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  U3K5X3
Domain Number 1 Region: 983-1065
Classification Level Classification E-value
Superfamily RING/U-box 8.83e-28
Family U-box 0.00000865
Further Details:      
 
Weak hits

Sequence:  U3K5X3
Domain Number - Region: 652-833
Classification Level Classification E-value
Superfamily ARM repeat 0.023
Family PBS lyase HEAT-like repeat 0.075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) U3K5X3
Sequence length 1077
Comment (tr|U3K5X3|U3K5X3_FICAL) Ubiquitination factor E4A {ECO:0000313|Ensembl:ENSFALP00000010427} KW=Complete proteome; Reference proteome OX=59894 OS=Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis). GN=UBE4A OC=Ficedula.
Sequence
MTDQENNNSISSNPFAALFGSVAAAKHFAAIQKQQQLRQLTGEETSISQDDSDNSVSESL
DDCDYSVAEISRSFRSQRELCEQLNINHMIQRIFLITLDNSDPSMKSGNGIPARCVYLEE
MAADLDDQDWLDMDNVEQALFTRLLLPEPGSHLIHMTCAGTQNLSAERDAGERQILRYLY
ACFRRAREEITKVPENLLPFAVRCRNLTVSNTRTVLLTPEIYVNQNVYEQLVDLMLETLR
GAQFEDMTEFLEDVIEALTTDEEVRTFGEVMVPVFDILLGRIKDLDLCQILLYTYLDVLL
YFTKQKDIAKVFAGYIQPKDPSNGQMYQKTLLGAVLNISCLLKTPGVVENHGYFLNPSRS
SPQEIKVQESNIHQQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANAGRTKIW
ANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSPKLLTFNPTYCALKELNEEERRS
KNVHMKGLEKETCLIPALSEQEPQFANSYNLVTENLVLTQYTLHLGFHRLHDQMVKINQS
LHRLQVAWREAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLL
VQLAVGNCGTEPLELRFPLPAVQHSALAYVPEFFADNLGDFFIFLRRFADDILETSADSL
EHILHFITVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQSPLVSSVFHRKRVFCSYQH
AGHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWDTDSYQDSIKALADYASE
NLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVQQIEKDRGEWDSLSPEARREKES
SLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMG
ALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKI
NKPGNMIVSFSNLAERIKSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTV
DRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKKQKEEELEDTLN
Download sequence
Identical sequences U3K5X3
ENSFALP00000010427

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]