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Domain assignment for V9KTT8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  V9KTT8
Domain Number 1 Region: 94-404
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.33e-100
Family WD40-repeat 0.0000000000204
Further Details:      
 
Domain Number 2 Region: 2-76
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 3.53e-26
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) V9KTT8
Sequence length 404
Comment (tr|V9KTT8|V9KTT8_CALMI) Lissencephaly-1-like protein {ECO:0000313|EMBL:AFP01847.1} OX=7868 OS=Callorhinchus milii (Ghost shark). GN= OC=Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus.
Sequence
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSAGPLGQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
SFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECLSWAPESSYPTVLEATGSE
AKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVLFHPGGKFIVSCADDK
TIRVWDYKNKRCMKTLNAHEHFVTSLDFHKAGPFVVTGSVDQTV
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Identical sequences V9KTT8

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