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Domain assignment for W5KN28 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  W5KN28
Domain Number 1 Region: 94-407
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.51e-99
Family WD40-repeat 0.0000000000195
Further Details:      
 
Domain Number 2 Region: 3-77
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 8.24e-24
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000181
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) W5KN28
Sequence length 410
Comment (tr|W5KN28|W5KN28_ASTMX) Lissencephaly-1 homolog {ECO:0000256|HAMAP-Rule:MF_03141} KW=Complete proteome; Reference proteome OX=7994 OS=Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus). GN=LIS1 OC=Astyanax.
Sequence
FGLSATKRFKLNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAQEEITLGGPIAQKRDPKEWIPRPPERYSLSGHRSPVTKVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCTKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHQTIMDATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGMMFHPGGKFIISCADDK
TLRIWDYKNKRCKKTLSAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
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Identical sequences W5KN28
ENSAMXP00000008990

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