SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000001290 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000001290
Domain Number 1 Region: 81-354
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.14e-40
Family WD40-repeat 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000001290   Gene: ENSFALG00000001241   Transcript: ENSFALT00000001297
Sequence length 570
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603279.1:738837:774184:1 gene:ENSFALG00000001241 transcript:ENSFALT00000001297 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTLLCTRCREGVVHVWSRVPQEKGVGMGQGQLWAPRAALCKQMSWNPQYRSSKFRHVFGK
AASKDKCYDCVPITRNVQDNHFCAVNPSFIAVVTECAGGGAFLVIPIKQTGKLDPHYPKV
CGHKGNVLDIKWNPFNDFVIASCSEDATVKIWDIPNQMLKRNITTPKKELIGHARRVGLI
EWHPTADNILFSSGYDYKIMIWNLDVKDAVLSNPVKILDAHKDVVLSMSFNTDGSLLATA
CRDRKIRVIDPRAGTVLQEGSYKSHKANKVLFIGNMKKLFSTGTSLWNNRQIALWDQNNL
SVPLLEEDLDGSSGLLFPIYDSDTHMLYVVGKGDGNIRYYEISPEKPYLNYLMEYRSPSP
QKGTGIMPKRGLDVSACEIFRFYKLIPTKSQIEPISMIVPRRSESYQEDIYPLTAAAQPA
LTAQEWLNGINKGPLLVSLRPGSEGVNSLAQFLEPEPLTKATDVSQQQGGGGRISLEDKQ
KPREIEGSRKRLKVEEKLPEDEQMCLSNGFDILECPTPKTKSELLQMYYRQQEEIRRLRE
LVNQRDVQIKQLKLGIRNLCASEISDTGNY
Download sequence
Identical sequences U3JET6
ENSFALP00000001290

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]