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Domain assignment for XP_005038489.1.66865 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005038489.1.66865
Domain Number 1 Region: 351-421
Classification Level Classification E-value
Superfamily Immunoglobulin 6.27e-16
Family C2 set domains 0.026
Further Details:      
 
Domain Number 2 Region: 32-125
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000115
Family I set domains 0.03
Further Details:      
 
Weak hits

Sequence:  XP_005038489.1.66865
Domain Number - Region: 304-362
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00166
Family C1 set domains (antibody constant domain-like) 0.072
Further Details:      
 
Domain Number - Region: 226-337
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00349
Family V set domains (antibody variable domain-like) 0.023
Further Details:      
 
Domain Number - Region: 161-201
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0454
Family C2 set domains 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005038489.1.66865
Sequence length 487
Comment PREDICTED: T-cell surface glycoprotein CD4 [Ficedula albicollis]; AA=GCF_000247815.1; RF=representative genome; TAX=59894; STAX=59894; NAME=Ficedula albicollis; AL=Chromosome; RT=Major
Sequence
MESCGKAVSHTSATFLLLHLGLISSMAHQNELQTGLAGGEVTLNCTGILPDSKLSRDTLV
HWKYYDTPLWRMEKGRPWRTSAFITDRFAIKTQYKQLWVRNLKLSDAGIYTCEYGSHKVR
TSLHIFKLMIPLDGHFLQNEVPELILMQNSSSPLPDLRITLLDSHNNRVTPELQNKSRQK
YIVNLRKLETMDSGTWVCQVHSDSPLIDQNIPFAVKVLGFQNPDLERKYATVDSTVILSW
HLNSQKIKWKEGFTGQLNWKQQESANPHELLDFNITAQGQLHETKKSSDFLFEIPEIKPE
STIEVKLPKVHFNHSGQYQCQLEYQGRHAQSKIELVVMKVSAKPVGPLSRGANMTLTCQV
AGPLPPNAYLRWERVNGTKMDIKNSKQKEVKLEVNISAAGLWSCHLIEDSDRKISAHYHV
EEAAAWTNYVIIGASVGGSLLVFAIGCLCIITVTNWQRRRQRAKRMAQARQYLLENKTCQ
CQHRLKK
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Identical sequences U3JQ50
ENSFALP00000004904 XP_005038489.1.66865

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