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Domain assignment for XP_005054068.1.66865 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005054068.1.66865
Domain Number 1 Region: 387-669
Classification Level Classification E-value
Superfamily WD40 repeat-like 5.01e-71
Family WD40-repeat 0.0000207
Further Details:      
 
Domain Number 2 Region: 123-190
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000119
Family RING finger domain, C3HC4 0.024
Further Details:      
 
Domain Number 3 Region: 246-338
Classification Level Classification E-value
Superfamily TRAF domain-like 0.000000000196
Family SIAH, seven in absentia homolog 0.012
Further Details:      
 
Domain Number 4 Region: 183-240
Classification Level Classification E-value
Superfamily TRAF domain-like 0.000000000654
Family SIAH, seven in absentia homolog 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005054068.1.66865
Sequence length 670
Comment PREDICTED: E3 ubiquitin-protein ligase TRAF7 [Ficedula albicollis]; AA=GCF_000247815.1; RF=representative genome; TAX=59894; STAX=59894; NAME=Ficedula albicollis; AL=Chromosome; RT=Major
Sequence
MSSSKNARYNRFSSGTTNITASENTNGTRMETTFGPAFSAVTTITKADGTNTFKQHRRTP
SSSSTLTYSPRDEDDGMPPISTPRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKPTAFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDMLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
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Identical sequences U3JLS6
ENSFALP00000003730 XP_005054067.2.66865 XP_005054068.1.66865

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