SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pa_1_210|chrm1_SC1|Putative from Podospora anserina

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Pa_1_210|chrm1_SC1|Putative
Domain Number 1 Region: 49-388
Classification Level Classification E-value
Superfamily WD40 repeat-like 5.65e-41
Family WD40-repeat 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Pa_1_210|chrm1_SC1|Putative
Sequence length 1378
Comment protein of unknown function
Sequence
MYHNQGKIMRKLLSKHATDSRESTASATVTSSPSNNYRPIAPQNVSYNTGAPLSCLDQSP
DGRSAVLASHHVLKLIKLDGGLRVQEEVDLRAILTSQPAHRNNVPTGAVADQLSIQDVKW
GSVINREVLFTACTSGIIFQYDVNRAKATRVGAPLEFIQMREDSRQVNSLDLNPHHSSWL
LSGSQDGLLRCFDVRTPVNTRTWPTYRALQSFKSHADGVRHVQWSPKDGFLFACGTEQGM
VLKWDMRKPSSPILRINAHEKACTSIAWHQDGTHLVSAGLDSKCNIWDMSKTDKRQKPKY
VISTPAPVGSLAWRPGQWSATAQGKRASQLAVSYDESGMKRFGMNSVHIWDLARPTMPYK
EIQRFDYAPNSILWHDQYLLWTAGRDGFHQCDVSFAPKVMDRQTMSAFAFSSQGEVAMCL
DERPMPTRPRPNIVHHDNASTHGTPSYSSSPTTPRFSVSRSDSEDDAVGSFLGPRQPGNG
SRKRRASMRSANTLSTTPPVGPAMGETLSLEDTIKVTGTYQPNQAMAIGTYLGPTNAEVD
VYLSLNYLQAIHLELPYKPGGPPLPERMTTILDHFAKAAARVRLSRLSHTWMNLLFLIKL
LLERRAQYHLEFRMDKYQNSTIKKKDAARHRSLGQLRAEPPSFGIGGEASARKMASLASF
DRVLHPRSLLSEELESTSNQPTPLARPVPDTQVIQIDDNGRKKLTPIIEPESFTLPPAAH
SRTLEPRSRLDSVPLSVTSHDSEATNASTEGYDFYDAEALSKAIDVPTRPKLTKVIDFRE
PGSPSRVRKPPVLRHDSDDSFTRLFSVSDESREATGVVRTSDSDTPSQVMREAIVAAIRR
DQPSASGSGSEDGEYESRIRGKQIAAGSSPGRHLERQLLQRTETDMTSYTAFTDEHHAIT
QTTTDSFESRFPSQTTDSGFGMDSPVRQSGIESPGQPQGLLSVEADWSPEDDLSPHIVET
DYLHWPGDPSYPHLLWSSNGSFGTGETLIQPEQQIAATLAYEVRKTARDAAAIILLFKPL
LAPDVLDSFQAAAILKQHHQRLMKLQAFTEAALMRKMCMKGWPGGVLSNWGENHPNVISP
AQRGVQVGLLCSSCRKPREIDRSEGSNETIWMCERCKASMAPCAVCQQRDIAPTPGSRGN
MKEGDEEEPVLATWWICPGCGHGGHSSCLQLWHEGFENECSSTDPDILAGFQSDGYCPMD
GCGHTCLPGKGRLETAAARTEEVGRAAAREATRNATSMKASADTESIVGGLQGHHHPHPP
HQYRTTGSGKILDDQHHQYPHYPSHGVNISNDEHSVPQSRAVESVRESLASMGISSHSHG
GSSSTRHSTPGASILSSSPGSRSAMMAAADRASGGHGGGDGRERRKSVKFVAQEDTKH
Download sequence
Identical sequences B2A9I8
Pa_1_210|chrm1_SC1|Putative XP_001912256.1.27508

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]